prot_Ecto-sp13_S_contig7932.19221.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7932.19221.1
Unique Nameprot_Ecto-sp13_S_contig7932.19221.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length441
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7932.19221.1 vs. uniprot
Match: D7FI06_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI06_ECTSI)

HSP 1 Score: 667 bits (1722), Expect = 3.260e-234
Identity = 377/417 (90.41%), Postives = 385/417 (92.33%), Query Frame = 0 
Query:   24 EEEGREREKAEGPPQQEEDRETGAPEGGVATAGTGPDAGVAAAAATVVEVGLCLQFVEGLCARAEEYSRHDAAETWKPLQDTVSRLERDNATLRSLLEPKYRAVGAAPPPVPIWSGRRSFGETHGSSVGSAATNVGNTPSKRVVELLRSTPLFVIEGKQVKAKVVSTVAXXXXXXXXXXXXXXXXXXXXXXXAPGSAAADLAGSRRHALLVRTAVKALTDVVGRVCESREEAFLKARLPGAQAYTVELERYGSTIAGGSALRATASSPEGRWASAGSVEVDDDLWRLFAAQETRLYSSSAALGKKPGRLYVTYSTLWFHSKVLGFESRHVLPLAEVVSITLLGTALDLSSSLIIATNSGGVPGELMFIFPGQKRRQVEPLEVLLRQLAVLAAKERAATAAIAEATEATAVASPDVSS 440
            EEEGRE EKAEGPP+QEED+ETG PEGGVATAG G DA VAAAAATVVEVGLCLQFVEGLCARAEEYSRHDAAETW+PLQDTVSRLERDNATLRSLLEPKYRAVGAAPPPVPIWSGRRSFGET+GSSVGSAATNVGN PSKRVVELLRSTPLFVI+GKQVKAKVVST A  XXXXXXX              A GSAA+DL GSRRHALLVR AVKALT+VVGRVCESREEAFLKARLPGAQAYTVELERYGSTIAGGSALRATASSPE  WASAGSVEVDDDLWRLFAAQETRLYSSSAALGKKPGRLYVTYSTLWFHSKVLGFESRHVLPLAEVVSITLLGTALDLSSSL+IATNSGGVPGELMFIFPGQKRRQVEPLEVLLRQLAVLAAKERAATA   EATEATA ASPDVSS
Sbjct:  330 EEEGREGEKAEGPPRQEEDQETGVPEGGVATAGAGADAVVAAAAATVVEVGLCLQFVEGLCARAEEYSRHDAAETWRPLQDTVSRLERDNATLRSLLEPKYRAVGAAPPPVPIWSGRRSFGETYGSSVGSAATNVGNAPSKRVVELLRSTPLFVIDGKQVKAKVVSTAAAAXXXXXXXKRDGERQIDGSSS-ATGSAASDLGGSRRHALLVRAAVKALTEVVGRVCESREEAFLKARLPGAQAYTVELERYGSTIAGGSALRATASSPERDWASAGSVEVDDDLWRLFAAQETRLYSSSAALGKKPGRLYVTYSTLWFHSKVLGFESRHVLPLAEVVSITLLGTALDLSSSLVIATNSGGVPGELMFIFPGQKRRQVEPLEVLLRQLAVLAAKERAATA---EATEATAAASPDVSS 742
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7932.19221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FI06_ECTSI3.260e-23490.41GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainPFAMPF02893GRAMcoord: 326..408
e-value: 3.3E-6
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7932contigEcto-sp13_S_contig7932:1..2565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7932.19221.1mRNA_Ecto-sp13_S_contig7932.19221.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7932 1..2565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7932.19221.1 ID=prot_Ecto-sp13_S_contig7932.19221.1|Name=mRNA_Ecto-sp13_S_contig7932.19221.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp
GSNSSSGASGSAASASAPGPVSPEEEGREREKAEGPPQQEEDRETGAPEG
GVATAGTGPDAGVAAAAATVVEVGLCLQFVEGLCARAEEYSRHDAAETWK
PLQDTVSRLERDNATLRSLLEPKYRAVGAAPPPVPIWSGRRSFGETHGSS
VGSAATNVGNTPSKRVVELLRSTPLFVIEGKQVKAKVVSTVAAAVAAASG
AAKRDGERQGDGSSSAPGSAAADLAGSRRHALLVRTAVKALTDVVGRVCE
SREEAFLKARLPGAQAYTVELERYGSTIAGGSALRATASSPEGRWASAGS
VEVDDDLWRLFAAQETRLYSSSAALGKKPGRLYVTYSTLWFHSKVLGFES
RHVLPLAEVVSITLLGTALDLSSSLIIATNSGGVPGELMFIFPGQKRRQV
EPLEVLLRQLAVLAAKERAATAAIAEATEATAVASPDVSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM