prot_Ecto-sp13_S_contig7923.19209.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7923.19209.1
Unique Nameprot_Ecto-sp13_S_contig7923.19209.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length439
Homology
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: D7FI29_ECTSI (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI29_ECTSI)

HSP 1 Score: 553 bits (1424), Expect = 8.110e-186
Identity = 382/393 (97.20%), Postives = 384/393 (97.71%), Query Frame = 0
Query:    6 QLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGRSNWDSSSPAPTADGSSSLYSPSSDGYG----RRGGYGGSRTP 394
            +LQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISR+QVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXX   GETPRGGGRSNWDSSSPAPTADG SSL SPSSDGYG    RRGGYGGSRTP
Sbjct:  536 ELQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRSQVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXXXXGETPRGGGRSNWDSSSPAPTADGGSSLGSPSSDGYGYGYGRRGGYGGSRTP 928          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A6H5JFI1_9PHAE (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI1_9PHAE)

HSP 1 Score: 498 bits (1281), Expect = 7.340e-167
Identity = 355/365 (97.26%), Postives = 356/365 (97.53%), Query Frame = 0
Query:    1 QVYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQV--KIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGR 356
            +VYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQV  KIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       GGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGR
Sbjct:  432 EVYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVEVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVGNQTPLGAGGXXXXXXXXXXXXXXXXXXXXAAGGETPRGGGR 796          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2VA26_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VA26_9STRA)

HSP 1 Score: 207 bits (527), Expect = 4.160e-57
Identity = 119/264 (45.08%), Postives = 168/264 (63.64%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEIN---ASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE---VPGTPYTM--QTPMHG 253
            V +SQL+E+ E +TG D LQGYELYDLV+L      NEVGV+ RV RED  V+NN G  +  RP+E+RGKRN+ S+RA  +D Q NQL   + V VVEG+H G   T+K ++R+ LFLHS+T +++AG+F V++RS +LAG  ++ +   G  G       S +       R R+D ++ KTV++  G  KG +G V + T THV+VELH++LKKVT++  +V ++GD+ GA   NQ   P +      P TP+    QTPMHG
Sbjct:  107 VRISQLRESAETTTGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIAREARPEELRGKRNAMSQRAVALDVQGNQLRSGDTVNVVEGRHKGKAATVKRMNRSQLFLHSQTRSEHAGVFVVKSRSCVLAGSRSQSRPGAGDGGATPWTPQSHQTGRPGAGRKRDDGLIGKTVRIQAGNWKGFIGTVSDTTGTHVEVELHARLKKVTVTHERVHVIGDKFGA-TENQTSNPAVNPQVMAPTTPFVAAGQTPMHG 369          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2V7W2_9STRA (Transcription elongation factor SPT5 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V7W2_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.910e-55
Identity = 119/264 (45.08%), Postives = 168/264 (63.64%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEIN---ASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE---VPGTPYTM--QTPMHG 253
            V +SQL+E+ E +TG D LQGYELYDLV+L      NEVGV+ RV RED  V+NN G  +  RP+E+RGKRN+ S+RA  +D Q NQL   + V VVEG+H G   T+K ++R+ LFLHS+T +++AG+F V++RS +LAG  ++ +   G  G       S +       R R+D ++ KTV++  G  KG +G V + T THV+VELH++LKKVT++  +V ++GD+ GA   NQ   P +      P TP+    QTPMHG
Sbjct:  562 VRISQLRESAETTTGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIAREARPEELRGKRNAMSQRAVALDVQGNQLRSGDTVNVVEGRHKGKAATVKRMNRSQLFLHSQTRSEHAGVFVVKSRSCVLAGSRSQSRPGAGDGGATPWTPQSHQTGRPGAGRKRDDGLIGKTVRIQAGNWKGFIGTVSDTTGTHVEVELHARLKKVTVTHERVHVIGDKFGA-TENQTSNPAVNPQVMAPTTPFVAAGQTPMHG 824          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: B7G376_PHATC (Transcription elongation factor SPT5 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G376_PHATC)

HSP 1 Score: 205 bits (521), Expect = 2.550e-54
Identity = 124/268 (46.27%), Postives = 165/268 (61.57%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAA-----VGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE-----VPGTPYTM--QTPMHG 253
            V  SQL+E+ EV++G D LQGYELYDLV+L      NEVGV+ RV RED  V+NN G V+ +RP+E+RGKRNS S+RA  +D Q NQ+   + V VVEG H G   TIK + R  LFLHS+T T +AGIF VR+RS +LAG   + + A     V       + ++         R+D ++ KTV++  GQ KG +G V +AT THV+VELHS+LKKV + R +V + GD+ GA    Q Q  ++        P TP+    QTPMHG
Sbjct:  583 VRTSQLRESAEVASGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIVREIRPEELRGKRNSTSQRAVALDVQGNQIRASDSVNVVEGPHKGKTATIKRMSRAQLFLHSQTRTDHAGIFVVRSRSCVLAGTRTQARGATPDSGVSPFATPQSQSRGGPQPGRGKRDDGLIGKTVRIQAGQWKGYLGTVADATATHVQVELHSRLKKVMVVRERVAVAGDKFGA---TQEQNRMVDVNPNPIAPTTPFVAAGQTPMHG 847          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2GRM5_9STRA (50S ribosomal protein L24, chloroplastic (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRM5_9STRA)

HSP 1 Score: 189 bits (481), Expect = 8.340e-53
Identity = 110/229 (48.03%), Postives = 148/229 (64.63%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGA 226
            V  SQLQE+ EV++G D L GYEL+DLV+L      NEVGV+ RV RE+  V+NN G V+ VRP+E+RGKRNS S+RA  +D Q NQ+   ++V + EG H G   TIK + R  LFL+S+T T++AGIF VR+RS +L+G   R  AA     +             R   D ++ KTVKV  G+ KG +G V +AT THV+VELHS++KKV + R +V +VGD+ GA
Sbjct:   51 VRTSQLQESAEVASGQDKLAGYELHDLVVLSGGGSANEVGVIVRVGREEFTVINNHGIVREVRPEELRGKRNSSSQRAVALDVQGNQIRCGDLVSIAEGPHKGKTATIKRMSRAQLFLYSQTRTEHAGIFVVRSRSCVLSGSRARPAAADTRQSQ----GGXXXXXXXRRGEDGLVGKTVKVQSGKWKGYLGCVSDATATHVQVELHSRMKKVMVVRERVVVVGDKFGA 275          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S2LCY0_9STRA (Transcription elongation factor SPT5 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCY0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 9.350e-53
Identity = 124/265 (46.79%), Postives = 164/265 (61.89%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAV------GYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGE--VPGTPYTM--QTPMH 252
            V  SQLQE+ E+++G D L GYEL+DLV+L      NEVGV+ RV RE+  V+NN G V+ VRP+E+RGKRNS SRRA  +D Q NQ+ V + V V EG H G   TIK ++R  LFL+S+T T++AGIF VR+RS +L+G  NR           G+ G   A  +   +K    R D ++ KTV+V  GQ KG +G V +AT THV VELHS+LKKV + R +V +VGD+ G+      Q+   G    P TP+     TPMH
Sbjct:  654 VRTSQLQESAEIASGQDKLAGYELHDLVVLSGGGSTNEVGVIVRVGREEFTVINNHGIVREVRPEELRGKRNSSSRRAVALDVQGNQIRVGDSVNVAEGPHKGKTATIKQMNRAQLFLYSQTRTEHAGIFVVRSRSCVLSGARNRSSMETANANGNGFKGGGGAGGRG--IK----REDGLIGKTVRVSSGQWKGYIGTVADATATHVSVELHSRLKKVMVLRERVAVVGDKYGSTDNPDRQQQYNGGGMAPTTPFLQGGATPMH 912          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A7S1GNB8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNB8_CYCTE)

HSP 1 Score: 195 bits (496), Expect = 1.060e-52
Identity = 118/265 (44.53%), Postives = 160/265 (60.38%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNR-----GQAAVGYMGEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQK---PVIGEVPGTPYTM--QTPMH 252
            V  SQL+E+ E+++G D L GYELYDLV+L      NEVGV+ RV RED  VVNN G  + VRP+E+RGK+N +S RA  VD Q NQ+ V + V V EG H G   TIK ++RT LFL+S+T T+NAGIF VR+RS +LAG  ++     G   V       + +          R+D ++ KTV++  GQ KG +G V +AT +HV+VELHS+LKKV ++R +V + GD+ G+           P     P TP+     TPMH
Sbjct:   79 VRTSQLRESAEMASGQDKLAGYELYDLVVLSGGGSTNEVGVIVRVGREDFTVVNNHGISREVRPEELRGKQNQRSNRALAVDVQANQIRVGDQVTVTEGPHKGKTATIKRMNRTQLFLYSQTRTENAGIFVVRSRSVMLAGSRSQRSSGGGDGGVSPFSTPRSQSSGPPGGARGKRDDALIGKTVRIQSGQWKGYLGTVADATASHVQVELHSRLKKVMVTRERVVVAGDKFGSTENTSRDNNPVPTSMIAPTTPFVAGGATPMH 343          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A1Z5KC20_FISSO (Transcription elongation factor SPT5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC20_FISSO)

HSP 1 Score: 193 bits (491), Expect = 2.680e-50
Identity = 118/260 (45.38%), Postives = 161/260 (61.92%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAG--RMNRGQAAVGYMGEI---NASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTPMH 252
            V  SQL+E+ E+++G D L GYELYDLV+L      NEVGV+ RV RED  V+NN G  + VRP+E+RGKRNS S RA  +D Q NQ+   ++V V EG H G   TIK + R  LFLHS+T +++AGIF VR+RS +L+G  + +RG    G +       + +    V    N++D ++ KTV+V  GQ KG +G V + T THV+VELHS+LKKV + R +V +VGD+ GA +  + Q     E       M TPMH
Sbjct:  600 VRTSQLRESAEIASGQDRLSGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGLAREVRPEELRGKRNSTSVRAVALDVQGNQIRCGDIVNVAEGPHKGKAATIKRMSRAQLFLHSQTRSEHAGIFVVRSRSCVLSGSRQQSRGSGIDGGVSPFATPQSQSTRGPVGGRGNKDDGLIGKTVRVQAGQWKGYIGTVADTTATHVQVELHSRLKKVLVVREKVIVVGDKFGATSA-ESQAIDSMESNHISQAMATPMH 858          
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Match: A0A6S8Z740_9STRA (Transcription elongation factor SPT5 n=9 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8Z740_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.780e-50
Identity = 108/232 (46.55%), Postives = 152/232 (65.52%), Query Frame = 0
Query:    2 VYVSQLQETPEVSTGLDSLQGYELYDLVMLG----PNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYMGEINASAKN---DIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRNQVKIVGDQTGA 226
            V +SQLQE+ EV++G D L GYEL+DLV+L      NEVG + RV RE+  V+NN G ++ VRP+E+RGKRNS S RA  +D Q NQ+ V + V+V EG H G   TIK + R  LFL+S+T T+NAG+F VR+RS +L+G   + + A G     +    N    I      ++D +++KTV++  G  KG +G V +AT THV+VELHS+LKK+ + R +V +VGD+ GA
Sbjct:  570 VRISQLQESAEVASGQDKLAGYELHDLVVLSGGGSTNEVGCIVRVGREEFTVINNHGIIREVRPEELRGKRNSSSGRAVALDVQGNQIRVGDTVKVAEGPHKGKSATIKRMSRAQLFLYSQTLTKNAGVFVVRSRSCVLSGNRVQNREAPGGASPFSTPRSNGNQQIGARGGRKDDGLISKTVRIQAGNWKGYLGTVSDATPTHVQVELHSRLKKIMVLRERVAVVGDKFGA 801          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7923.19209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI29_ECTSI8.110e-18697.20Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
A0A6H5JFI1_9PHAE7.340e-16797.26Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
A0A7S2VA26_9STRA4.160e-5745.0850S ribosomal protein L24, chloroplastic n=1 Tax=A... [more]
A0A7S2V7W2_9STRA3.910e-5545.08Transcription elongation factor SPT5 n=1 Tax=Amphi... [more]
B7G376_PHATC2.550e-5446.27Transcription elongation factor SPT5 n=2 Tax=Phaeo... [more]
A0A7S2GRM5_9STRA8.340e-5348.0350S ribosomal protein L24, chloroplastic (Fragment... [more]
A0A7S2LCY0_9STRA9.350e-5346.79Transcription elongation factor SPT5 n=2 Tax=Lepto... [more]
A0A7S1GNB8_CYCTE1.060e-5244.53Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5KC20_FISSO2.680e-5045.38Transcription elongation factor SPT5 n=2 Tax=Fistu... [more]
A0A6S8Z740_9STRA2.780e-5046.55Transcription elongation factor SPT5 n=9 Tax=Chaet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 170..197
e-value: 14.0
score: 13.5
coord: 84..111
e-value: 0.0012
score: 28.1
IPR005824KOWPFAMPF00467KOWcoord: 87..112
e-value: 2.5E-5
score: 24.1
IPR024945Spt5 C-terminal domainSMARTSM01104CTD_2coord: 253..368
e-value: 1.9E-4
score: 30.7
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 156..224
e-value: 5.9E-18
score: 66.1
IPR039659Transcription elongation factor SPT5PANTHERPTHR11125SUPPRESSOR OF TY 5coord: 2..412
NoneNo IPR availablePANTHERPTHR11125:SF7TRANSCRIPTION ELONGATION FACTOR SPT5coord: 2..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7923contigEcto-sp13_S_contig7923:1081..7164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7923.19209.1mRNA_Ecto-sp13_S_contig7923.19209.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7923 1081..7164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7923.19209.1 ID=prot_Ecto-sp13_S_contig7923.19209.1|Name=mRNA_Ecto-sp13_S_contig7923.19209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=439bp
QVYVSQLQETPEVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVV
NNSGNVKRVRPQEIRGKRNSQSRRAFVVDTQQNQLEVDNVVEVVEGQHAG
SKGTIKHIDRTTLFLHSRTHTQNAGIFPVRARSALLAGRMNRGQAAVGYM
GEINASAKNDIVKDFRNRNDEMLAKTVKVIRGQHKGLMGQVVEATDTHVK
VELHSKLKKVTISRNQVKIVGDQTGAYAGNQFQKPVIGEVPGTPYTMQTP
MHGSQTPMHGSQTPMHGSQTPMHGSQTPMHGSQTPVHGSQTPIHGSQTPI
HGSQTPMGGSGGGVGNQTPLGAGGQTPLHGSQTPMHGAQTPIHGAAGGET
PRGGGRSNWDSSSPAPTADGSSSLYSPSSDGYGRRGGYGGSRTPQSESYS
PMSSSPGGGSVQNGSYTPVSGRNTHSSRSVGRDEGGVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005824KOW
IPR024945Spt5_C_dom
IPR014722Rib_L2_dom2
IPR039659SPT5