prot_Ecto-sp13_S_contig7920.19204.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7920.19204.1
Unique Nameprot_Ecto-sp13_S_contig7920.19204.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp13_S_contig7920.19204.1 vs. uniprot
Match: D7FT69_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT69_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 2.310e-75
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0
Query:    1 GGRKQSLSKSKTSAGAEEAEAMDPKTLAMRAKHIECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAFSGKLSNPCPVRDGGPRAHFYNPSR 124
            GGRKQSLSKSK SAGAEEAEAMDPKTLAMRAKH+ECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAFSGKLSNPCPVRDGGPRAHFYNPSR
Sbjct: 2375 GGRKQSLSKSKASAGAEEAEAMDPKTLAMRAKHVECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAFSGKLSNPCPVRDGGPRAHFYNPSR 2498          
BLAST of mRNA_Ecto-sp13_S_contig7920.19204.1 vs. uniprot
Match: A0A6H5L4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R7_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 4.530e-73
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0
Query:    1 GGRKQSLSKSKTSAGAEEAEAMDPKTLAMRAKHIECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAFSGKLSNPCPVRDGGPRAHFYNPSR 124
            GGRKQSLSKSK SAGAEEAEAMD KTLA+RAKHIECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAFSGKLSNPCPVRDGGPRAHFYNP R
Sbjct: 2529 GGRKQSLSKSKASAGAEEAEAMDTKTLAVRAKHIECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAFSGKLSNPCPVRDGGPRAHFYNPLR 2652          
BLAST of mRNA_Ecto-sp13_S_contig7920.19204.1 vs. uniprot
Match: A0A835YLN5_9STRA (Dynein heavy chain and region D6 of dynein motor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.370e-21
Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 0
Query:   14 AGAEEAEAMDPKTLAMRAKHIECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAFSGKLSNPCPVRDG--GPRAHFYN 121
            A A   E M      MR +HIEC F+F LVWS+G +G E  Q+ + +FL   +AD   IE +W GVNN+L+VR+W PP+F  + R F G ++ P P  DG  G RAH Y+
Sbjct: 1337 AAAMALEGMSLDAQPMRQRHIECSFLFALVWSVGCSGDEPSQRKWEDFLWQFMADSACIEMDWPGVNNSLKVREWEPPDFTAEDRMFKGTMALPVPA-DGSWGLRAHCYS 1445          
BLAST of mRNA_Ecto-sp13_S_contig7920.19204.1 vs. uniprot
Match: F0Y0V2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0V2_AURAN)

HSP 1 Score: 68.2 bits (165), Expect = 8.100e-11
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 0
Query:   30 RAKHIECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIEN-EWEGVNNALQVRKWSPPNFAEKGRA-FSGKLSNPC-PVRDGGPRAHFYNP 122
            R KH+EC F+F L+WS G T   AG+  +  F+  I+  + V+++  ++GV NAL VR W  P FAE     F GK+   C P  DG  +   Y+P
Sbjct: 1332 RKKHVECAFLFALIWSSGVTADNAGRAKYSAFVREIMESVDVLDDARYQGVTNALAVRGWKRPKFAEAEEGEFDGKVE--CGPPADGDLQDWCYDP 1425          
BLAST of mRNA_Ecto-sp13_S_contig7920.19204.1 vs. uniprot
Match: F0YMK2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMK2_AURAN)

HSP 1 Score: 55.8 bits (133), Expect = 1.650e-6
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0
Query:   25 KTLAMRAKHIECCFMFGLVWSLGSTGVEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRA 99
            K    R +HIEC F++ L+WS+G++G E  Q  F  FL +I++D  VI   +  V+ +L  R W  P    KG A
Sbjct:  854 KERRQRRQHIECAFLWALLWSVGASGPETAQTQFGVFLRDIISDSRVIRTRYMTVHESLTRRGWCLP-LPSKGSA 927          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7920.19204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FT69_ECTSI2.310e-7598.39Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5L4R7_9PHAE4.530e-7396.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLN5_9STRA3.370e-2145.45Dynein heavy chain and region D6 of dynein motor-d... [more]
F0Y0V2_AURAN8.100e-1139.58Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0YMK2_AURAN1.650e-638.67Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041466Dynein heavy chain, AAA 5 extension domainPFAMPF17852Dynein_AAA_lidcoord: 18..67
e-value: 5.5E-8
score: 33.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7920contigEcto-sp13_S_contig7920:2120..3871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7920.19204.1mRNA_Ecto-sp13_S_contig7920.19204.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7920 2120..3872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7920.19204.1 ID=prot_Ecto-sp13_S_contig7920.19204.1|Name=mRNA_Ecto-sp13_S_contig7920.19204.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
GGRKQSLSKSKTSAGAEEAEAMDPKTLAMRAKHIECCFMFGLVWSLGSTG
VEAGQKAFLEFLDNIVADLGVIENEWEGVNNALQVRKWSPPNFAEKGRAF
SGKLSNPCPVRDGGPRAHFYNPSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041466Dynein_AAA5_ext