prot_Ecto-sp13_S_contig7911.19190.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7911.19190.1
Unique Nameprot_Ecto-sp13_S_contig7911.19190.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7911.19190.1 vs. uniprot
Match: D8LTI7_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI7_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 2.310e-40
Identity = 76/79 (96.20%), Postives = 76/79 (96.20%), Query Frame = 0 
Query:   30 MEFSIGTCVETTLGTGVLVEIRQEDDVHVVRLWRSRGAGSAKAYLHPDAVLRELPAAVGVRVKTPEGDGVVVGFMSGGR 108
            M FSIGTCVETTLGTGVLVEIRQEDDVHVVRLWRSRGAGSAKAYLHP AVLRELPAAVGVRVKTPEGDGVVVGFMS GR
Sbjct:    1 MGFSIGTCVETTLGTGVLVEIRQEDDVHVVRLWRSRGAGSAKAYLHPGAVLRELPAAVGVRVKTPEGDGVVVGFMSRGR 79
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BLAST of mRNA_Ecto-sp13_S_contig7911.19190.1 vs. uniprot
Match: A0A833SGW7_PHYIN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A833SGW7_PHYIN)

HSP 1 Score: 59.7 bits (143), Expect = 4.170e-8
Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:   27 ERGMEFSIGTCVETTLGTGVLVEIRQEDDVHVVRLWRSRGAGSAKAYLHPDAVLRELPAAVGVRVKTPEGDGVVV 101
            +R +   +G  V+TT G+GVL ++R++D +HVV L     +  A+AYLHP +V   + A+ G  V TP G GVV+
Sbjct: 1166 QRPVRGVVGKPVDTTYGSGVLEQVREDDGIHVVVLRLGLMSAQARAYLHPTSVFGAIKASRGDVVMTPFGSGVVM 1240
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7911.19190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTI7_ECTSI2.310e-4096.20Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A833SGW7_PHYIN4.170e-841.33Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7911contigEcto-sp13_S_contig7911:1125..2057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7911.19190.1mRNA_Ecto-sp13_S_contig7911.19190.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7911 1125..2057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7911.19190.1 ID=prot_Ecto-sp13_S_contig7911.19190.1|Name=mRNA_Ecto-sp13_S_contig7911.19190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
MIQASDGLLQVLHCSPGERRARERERERGMEFSIGTCVETTLGTGVLVEI
RQEDDVHVVRLWRSRGAGSAKAYLHPDAVLRELPAAVGVRVKTPEGDGVV
VGFMSGGR
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