prot_Ecto-sp13_S_contig7906.19185.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7906.19185.1
Unique Nameprot_Ecto-sp13_S_contig7906.19185.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length722
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7906.19185.1 vs. uniprot
Match: D7FHW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW6_ECTSI)

HSP 1 Score: 681 bits (1757), Expect = 5.970e-237
Identity = 417/594 (70.20%), Postives = 435/594 (73.23%), Query Frame = 0 
Query:  129 MEDRIKLEVQTVVRQDVDQRVSLAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAHTTALEQLQANQQRTRSTVTLLETWRADSERWCARTSETLHSLTEDSRALSRRAHTQQKALDEVEVAQEDLAVSVKSTRRVGEAASASAMAPIREHFLQEIETIRRRLSALESETQTSATAAVSGADPTMVKSIVVEETSAKAEEVWRKAKEYVREQVVEEAKTTADAAAATIIGLELRLAEVERRVSAYGPALKTQKKAEGDISREPLGVRDAMEALQKRLAESLARIDDELCELRSRLDRNAAKTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKRLDELERLWKQTTPTDLTPAAVAAPSSAAAEKVEGIAKTVQEMASGVEAAGRQQAIFENSLEEVSETLNGHALKLRCLEGLWRQTGANIEKNVEGGASADDGVSSTRSSSTPDCSRKHQNLEQQXXXXQQHLHAAVMPVEGHAAAAQTAPAFRTGLSGLLKRLGSSSMSSAEKEVGTNAADKDNEVGLGTPRPSLGETTDSEKKAVPQSDAVDLRTELAAGGGGNENLPMGSGHAVQDNVDRREGSRGRKNSSDCC 722
            MEDRIKLEVQTVVR+DVDQRVSLAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAH TALEQLQA+QQRTRSTVTLLETWRAD E WCARTSE+LHSLTEDSRALSRRAHTQQKAL EVEVAQEDLAV VKSTRRVGEAASASAMAPIREHFLQEIETIRRRLSALE+E QT+ATAAVSG DPTMVKSI VEE SAKAE                                     EVERRVSAYGPAL+T KKAEGDISR  LGVRD MEALQKRLAE+LARIDDELC+LRSR DRNAAKTA                               KRLDELERLW++ TPTDLTPA V APSSAA EKVEGIAKTVQEMA G EAA RQ+AIFENS                                                       RKHQNLEQQ    QQHLHA  MPVEGHA AAQTAPAFRTGLSGLLKRLGS+S+SS +KEVGTNAADKDNEVGLGT RPSLGETTDSEKKAVPQSDA DLRTELAAGGGGNENLP+ SG A QD+VD+REGSRGRK+SS  C
Sbjct:    1 MEDRIKLEVQTVVRRDVDQRVSLAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAHATALEQLQASQQRTRSTVTLLETWRADREGWCARTSESLHSLTEDSRALSRRAHTQQKALGEVEVAQEDLAVLVKSTRRVGEAASASAMAPIREHFLQEIETIRRRLSALENEAQTTATAAVSGVDPTMVKSIAVEEASAKAE-------------------------------------EVERRVSAYGPALETHKKAEGDISRGALGVRDTMEALQKRLAENLARIDDELCDLRSRHDRNAAKTAETAALSAIEQQQVTQSVSDGLDGRQDLKPLAKRLDELERLWERKTPTDLTPATVTAPSSAAVEKVEGIAKTVQEMALGAEAASRQRAIFENS------------------------------------------------------GRKHQNLEQQQQK-QQHLHAGAMPVEGHAVAAQTAPAFRTGLSGLLKRLGSNSLSSGQKEVGTNAADKDNEVGLGTQRPSLGETTDSEKKAVPQSDAADLRTELAAGGGGNENLPLRSGSAAQDDVDQREGSRGRKDSSGSC 502
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7906.19185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHW6_ECTSI5.970e-23770.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..372
NoneNo IPR availableCOILSCoilCoilcoord: 280..300
NoneNo IPR availableCOILSCoilCoilcoord: 149..169
NoneNo IPR availableCOILSCoilCoilcoord: 401..421
NoneNo IPR availableCOILSCoilCoilcoord: 722..722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7906contigEcto-sp13_S_contig7906:2..6634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7906.19185.1mRNA_Ecto-sp13_S_contig7906.19185.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7906 2..6634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7906.19185.1 ID=prot_Ecto-sp13_S_contig7906.19185.1|Name=mRNA_Ecto-sp13_S_contig7906.19185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=722bp
MCTLAPWMGDGWESNIARLIDQANRTLSSSANARQNSGGGRTASPHRGDR
HNPLSLSSAASPSTIRGDRGASYRRGTEGWGASLLVRDGVGDGGGSGDKF
PAPCPPPPAPASFSRLAAARVEGARIDGMEDRIKLEVQTVVRQDVDQRVS
LAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAHTTALEQLQANQQR
TRSTVTLLETWRADSERWCARTSETLHSLTEDSRALSRRAHTQQKALDEV
EVAQEDLAVSVKSTRRVGEAASASAMAPIREHFLQEIETIRRRLSALESE
TQTSATAAVSGADPTMVKSIVVEETSAKAEEVWRKAKEYVREQVVEEAKT
TADAAAATIIGLELRLAEVERRVSAYGPALKTQKKAEGDISREPLGVRDA
MEALQKRLAESLARIDDELCELRSRLDRNAAKTAATAALSAIEQQQVTQS
ASDGLDGREDLKPLVKRLDELERLWKQTTPTDLTPAAVAAPSSAAAEKVE
GIAKTVQEMASGVEAAGRQQAIFENSLEEVSETLNGHALKLRCLEGLWRQ
TGANIEKNVEGGASADDGVSSTRSSSTPDCSRKHQNLEQQQQQKQQHLHA
AVMPVEGHAAAAQTAPAFRTGLSGLLKRLGSSSMSSAEKEVGTNAADKDN
EVGLGTPRPSLGETTDSEKKAVPQSDAVDLRTELAAGGGGNENLPMGSGH
AVQDNVDRREGSRGRKNSSDCC
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