prot_Ecto-sp13_S_contig79043.19183.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig79043.19183.1
Unique Nameprot_Ecto-sp13_S_contig79043.19183.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A6H5KWP2_9PHAE (DUF2407_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP2_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.040e-34
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    1 FDDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRPDDEDES 69
            FDDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANR D EDES
Sbjct:  235 FDDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRRD-EDES 302          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A7S2BG25_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BG25_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.300e-11
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    3 DAGSGGT------RDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQ 54
            DA  GG+      RDF++GF MG FLGVIML WLWE +V  RQK+GIL GVT + +++
Sbjct:   15 DADGGGSDQVGLPRDFVWGFLMGFFLGVIMLFWLWERSVSHRQKMGILTGVTCQLSLR 72          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A7R9U1S3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1S3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 7.460e-11
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    2 DDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRPDD 65
            D A  G  RDF++GF MG FLGVIML WLWE +V +RQK+GI+ GV+ + ++  V     RP D
Sbjct:  212 DVAAPGSMRDFVWGFFMGFFLGVIMLFWLWERSVSQRQKMGIIFGVSLQLSLNFVH---QRPSD 272          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A835Z7C3_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C3_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 7.790e-11
Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    7 GGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQ 57
            G +RDF+FGF MG FLG IML WLWE  VP RQK GI+AGV F   + + Q
Sbjct:  300 GTSRDFVFGFIMGGFLGFIMLFWLWEPNVPHRQKGGIVAGVMFNLLINLWQ 350          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A7S0H7Y8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H7Y8_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 1.130e-9
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    7 GGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRPD 64
            G   DF+ GF MG FLGV+ L+W+W+ AVPRRQKLGI+ G      +  +Q A  + D
Sbjct:  145 GSNGDFILGFIMGFFLGVLTLIWVWQRAVPRRQKLGIMLGFGCNLLLSFIQVANQQHD 202          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A7S4DFP3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DFP3_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 3.320e-9
Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    7 GGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRPDDE 66
            G   DF+ GF MG FLGV+ L+W+W+ AVPRRQKLGI+ G      +  VQ A  + + E
Sbjct:  182 GTNGDFVLGFIMGFFLGVLTLIWVWQRAVPRRQKLGIMLGFGCNLVLSFVQVANQQHEHE 241          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: L1JZ50_GUITC (Ubiquitin-like domain-containing protein n=4 Tax=Geminigeraceae TaxID=589343 RepID=L1JZ50_GUITC)

HSP 1 Score: 59.3 bits (142), Expect = 9.060e-9
Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 0
Query:    2 DDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAA 60
            ++   G   D M G  MG   G+IML W+WE  +PRRQKLGIL G+    T+ M++  A
Sbjct:  193 EEVAEGTQADMMLGLVMGFIFGIIMLFWIWERGIPRRQKLGILCGIGCNLTMGMIRLQA 251          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A7S0N5E9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N5E9_9CRYP)

HSP 1 Score: 57.4 bits (137), Expect = 4.850e-8
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    3 DAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMV 56
            +A  G   D + G  MG   GVIML W+WE  +PRRQK+GIL G+    T+ M+
Sbjct:  207 EASEGTQADMLLGMVMGFVFGVIMLFWIWERGIPRRQKIGILCGIGCNVTMGMI 260          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A7S1C9X1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9X1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.920e-8
Identity = 27/63 (42.86%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    7 GGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRPDDEDES 69
            G   D ++GFA+G FLG +ML W+W  ++ R+QKLGILAGV     + +++ +A   D  D S
Sbjct:  191 GSNGDLVWGFALGFFLGFLMLFWVWNGSIRRKQKLGILAGVMCNLMMALMRQSARANDPTDTS 253          
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Match: A0A1Z5K7V7_FISSO (Ubiquitin-like domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7V7_FISSO)

HSP 1 Score: 57.4 bits (137), Expect = 5.640e-8
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    7 GGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGV 47
            G  RDF++GF MG F+G++MLLW+W  +VP +QKLGIL G+
Sbjct:  258 GTDRDFVWGFCMGFFVGLLMLLWVWIPSVPHKQKLGILTGI 298          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79043.19183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWP2_9PHAE1.040e-3497.10DUF2407_C domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2BG25_9STRA2.300e-1155.17Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9U1S3_9STRA7.460e-1151.56Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835Z7C3_9STRA7.790e-1160.78Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
A0A7S0H7Y8_9EUKA1.130e-948.28Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S4DFP3_9EUKA3.320e-948.33Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
L1JZ50_GUITC9.060e-944.07Ubiquitin-like domain-containing protein n=4 Tax=G... [more]
A0A7S0N5E9_9CRYP4.850e-846.30Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1C9X1_9STRA4.920e-842.86Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1Z5K7V7_FISSO5.640e-858.54Ubiquitin-like domain-containing protein n=2 Tax=F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025390Domain of unknown function DUF2407 C-terminalPFAMPF13373DUF2407_Ccoord: 5..56
e-value: 2.9E-8
score: 34.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig79043contigEcto-sp13_S_contig79043:29..238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig79043.19183.1mRNA_Ecto-sp13_S_contig79043.19183.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig79043 29..238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig79043.19183.1 ID=prot_Ecto-sp13_S_contig79043.19183.1|Name=mRNA_Ecto-sp13_S_contig79043.19183.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
FDDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFK
QTVQMVQAAANRPDDEDES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025390DUF2407_C