prot_Ecto-sp13_S_contig78.19049.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78.19049.1
Unique Nameprot_Ecto-sp13_S_contig78.19049.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length668
Homology
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: D8LT01_ECTSI (DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT01_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 3.960e-106
Identity = 198/235 (84.26%), Postives = 204/235 (86.81%), Query Frame = 0
Query:    1 MVADAADANGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRNGAGGSGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTHRLSGVRCPQSVNIPVPKAPPPPERVHEESPFAPRGXXXXXXXXXXXXXXXXXXASSKPKGKAIAPKDFXXXXXXXXXXXKAGDGK 235
            M ADAADA+GGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGR+G GG GAVEVKLVSAEGLDSTRKALETVTCVHVYSVQ APCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTHRLSGVRCP+ V++PVPKAPP               XXXXXXXXXXXXXXXX  ASSKPKGKAIAPKDF     XX    KAG+GK
Sbjct:    1 MAADAADASGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRSGIGGFGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQPAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTHRLSGVRCPEGVDVPVPKAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAAAGXXKGKGKAGEGK 235          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: A0A6H5KL09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL09_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 6.900e-83
Identity = 267/332 (80.42%), Postives = 271/332 (81.63%), Query Frame = 0
Query:  336 KGGDTDXXXXXXASEGEGDGLEDSEEEWDDGNAAKSETPSKTNGVGVGSSXXXXXXXXXXXXXXXXGPAAAKNTKAXXXXXXXXXXXXXXXXXXXXXXXXXXASPVGDDGSDDEAGGREEAESTPGSGAATIGRGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXTSKKEPVRGAMDKFTAKDNGTGVDSNGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEALQPAKTNQTRTPPQGMKKAKIGVENKAEGSVETPASANGKDGXXXXXXXXXXXAPKSGGKQASMMSFFKKA 667
            +GGD D    XXASEGEGDGLEDSEEEWDDG A KS+TPSKTNGVGVGSS  XXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXXXX SPVGDD SDDEA GREEAESTPGSGAAT      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            Y XXXXXXX    EPVRGAMDKFTAK NGTGVDS+GVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEALQPAKTNQ+RTPP G KKAKIGVENKAEGSVETPA A GKDG           APKSGGKQASMMSFFKKA
Sbjct:   18 QGGDKDGGVGXXASEGEGDGLEDSEEEWDDGTAEKSKTPSKTNGVGVGSSGSXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVGDDSSDDEARGREEAESTPGSGAATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAASTSAKRKGRYDXXXXXXXXXXXEPVRGAMDKFTAKGNGTGVDSSGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEALQPAKTNQSRTPPPGTKKAKIGVENKAEGSVETPAGAKGKDGATATKKKTAKAAPKSGGKQASMMSFFKKA 343          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: UPI001B88DBF9 (DNA polymerase delta subunit 3-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBF9)

HSP 1 Score: 86.7 bits (213), Expect = 3.000e-14
Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERK---VSATYLVVGRNGAGGSGAVEVK--LVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTHRLSGVRCP 158
            YLD L+ +V DE +VVT++WL+ VL+V  N AK+ML+ FC++Q  +    +S TY V G   AG     E K  +VS E L+S + +L  V CVH+YS+  +         S  L+  D +  KE   +ST+  A         +RCP
Sbjct:    7 YLDNLDEFVNDENRVVTYKWLSRVLTVHVNEAKRMLFAFCEQQRNKDHDDISVTYFVAGSTAAGMHSPQEYKCAVVSEEQLESYKASLAVVNCVHIYSIHKSKLKD-----SNALYIADCDGFKEHALQSTQHSA---------IRCP 140          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: A0A8B9JG61_ASTMX (DNA polymerase delta subunit 3 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9JG61_ASTMX)

HSP 1 Score: 84.3 bits (207), Expect = 9.370e-14
Identity = 57/153 (37.25%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFC-QRQGERK---VSATYLVVGRNGAGGSGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRT-HRLSGVRCPQSVNI 163
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLY +  QR+ ER    + ATYLV G+    GS   +V +V  + LD T+  L+    VHVYSVQ A         S  L++TD +  KE          NL+  ++ S +RC  +V +
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKD-----SGPLYSTDYDAVKE----------NLKNCNKYSTIRCAAAVPL 142          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3)

HSP 1 Score: 84.3 bits (207), Expect = 1.050e-13
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRNGAGGSGAVEVKLVSAEG--LDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGA 145
            YL+ L+ +V+DE K+VT++WL+  LSV  N AK+MLY + Q+Q ++ +  TYLV G     G G V  KL    G  L++T+ +L+ VT VH+YS+            S  L+  D + TKE + +S + GA
Sbjct:    7 YLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLVGGEQ-KDGDGLVMKKLSLVRGNQLEATKCSLDKVTSVHIYSIHKCLLKD-----SNALYTVDYDITKEHLHQSNKFGA 132          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: W5K564_ASTMX (DNA polymerase delta subunit 3 n=4 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K564_ASTMX)

HSP 1 Score: 84.3 bits (207), Expect = 1.680e-13
Identity = 57/153 (37.25%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFC-QRQGERK---VSATYLVVGRNGAGGSGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRT-HRLSGVRCPQSVNI 163
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLY +  QR+ ER    + ATYLV G+    GS   +V +V  + LD T+  L+    VHVYSVQ A         S  L++TD +  KE          NL+  ++ S +RC  +V +
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKD-----SGPLYSTDYDAVKE----------NLKNCNKYSTIRCAAAVPL 142          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: A0A8D0BHP5_9SAUR (DNA polymerase delta subunit 3 n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BHP5_9SAUR)

HSP 1 Score: 84.0 bits (206), Expect = 2.120e-13
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSA----TYLVVGRNGAGGSGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANL-RTHRLSGVRCPQSV 161
            YL+ ++ +V D+ +VVT++WL+  L V  N AK+MLYD+ +R+ +    A    TYLV G     GS   +V +V  E L++ +  L T+ CVHVYS+Q A         S+ L+ TD +  K          ANL +  + S +RC  +V
Sbjct:    6 YLENIDEFVTDQNRVVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVTYLVAGNLVQNGSTCHKVAVVKEEKLEAMKSKLSTIACVHVYSIQKATLKD-----SSPLYNTDYDIIK----------ANLQKCSKFSAIRCAAAV 141          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: A0A672MBU9_SINGR (DNA polymerase delta subunit 3 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MBU9_SINGR)

HSP 1 Score: 81.3 bits (199), Expect = 2.380e-13
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERK----VSATYLVVGRNGAGGSGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRT-HRLSGVRCPQSV 161
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLY + Q++        + ATYLV G+    GS   +V +V  + LD+ +  ++    VHVYSVQ A         S+ L+ TD E  KE          NL+  ++ S +RC  +V
Sbjct:    6 YLDNIDEFVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLQQKRNESSGTPLHATYLVSGKCVENGSTCHKVSVVREDKLDAVKAKMDVTISVHVYSVQRAELKD-----SSPLYNTDYEAVKE----------NLKNCNKYSAIRCAAAV 141          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: A0A2P2I6W8_9CRUS (DNA polymerase delta subunit 3 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I6W8_9CRUS)

HSP 1 Score: 82.0 bits (201), Expect = 5.740e-13
Identity = 45/144 (31.25%), Postives = 78/144 (54.17%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRNGA-GGSGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTHRLSGVRCP 158
            Y+D LE ++ DE +VVT++WL++ L +  N AK++LY +   + E  +  TYLV+G +    G    ++ +  +  L++ +K L+ V CVHVYS+  +       D +  L+  D + T+E +  +TE G         G+ CP
Sbjct:   95 YMDNLEEYINDENRVVTYKWLSITLQIPCNTAKRLLYHYLSTKNEDDLHITYLVMGTSTTPDGIKQAQIHVAPSLELEAVKKLLDAVECVHVYSLSKSKLK----DQTAALYTADYDCTRENLATATEYG---------GIECP 225          
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Match: A0A3B4E554_PYGNA (DNA polymerase delta subunit 3 n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4E554_PYGNA)

HSP 1 Score: 81.3 bits (199), Expect = 9.920e-13
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 0
Query:   16 YLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFC-QRQGERK---VSATYLVVGRNGAGGSGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKE 135
            YLD ++ +V D+ K+VT++WL+L L V  N AK+MLY +  QR+ ER    + ATYLV G+    G+   +V +V  + L+ T+  LE    VHVYS+Q A         S+ L++TD +  KE
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNIAKQMLYHYLEQRRKERSGTTLHATYLVSGKCSENGNVCHKVSVVREDQLEDTKSKLEKTISVHVYSIQKAELKD-----SSPLYSTDYDAVKE 123          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78.19049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT01_ECTSI3.960e-10684.26DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus ... [more]
A0A6H5KL09_9PHAE6.900e-8380.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001B88DBF93.000e-1437.16DNA polymerase delta subunit 3-like isoform X1 n=2... [more]
A0A8B9JG61_ASTMX9.370e-1437.25DNA polymerase delta subunit 3 n=1 Tax=Astyanax me... [more]
UPI0001CB96C31.050e-1338.64DNA polymerase delta subunit 3-like n=1 Tax=Saccog... [more]
W5K564_ASTMX1.680e-1337.25DNA polymerase delta subunit 3 n=4 Tax=Astyanax me... [more]
A0A8D0BHP5_9SAUR2.120e-1335.10DNA polymerase delta subunit 3 n=1 Tax=Salvator me... [more]
A0A672MBU9_SINGR2.380e-1335.10DNA polymerase delta subunit 3 n=1 Tax=Sinocycloch... [more]
A0A2P2I6W8_9CRUS5.740e-1331.25DNA polymerase delta subunit 3 (Fragment) n=1 Tax=... [more]
A0A3B4E554_PYGNA9.920e-1339.52DNA polymerase delta subunit 3 n=2 Tax=Serrasalmid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019038DNA polymerase delta subunit 3PFAMPF09507CDC27coord: 29..333
e-value: 1.7E-30
score: 106.8
IPR019038DNA polymerase delta subunit 3PANTHERPTHR17598FAMILY NOT NAMEDcoord: 367..666
coord: 12..331
IPR041913DNA polymerase delta subunit 3 superfamilyGENE3D1.10.10.1300coord: 12..163
e-value: 3.9E-32
score: 113.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78contigEcto-sp13_S_contig78:20669..27677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78.19049.1mRNA_Ecto-sp13_S_contig78.19049.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78 19683..27754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78.19049.1 ID=prot_Ecto-sp13_S_contig78.19049.1|Name=mRNA_Ecto-sp13_S_contig78.19049.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=668bp
MVADAADANGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKM
LYDFCQRQGERKVSATYLVVGRNGAGGSGAVEVKLVSAEGLDSTRKALET
VTCVHVYSVQAAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTH
RLSGVRCPQSVNIPVPKAPPPPERVHEESPFAPRGGGAATGGAAGDGGGG
PKNASSKPKGKAIAPKDFFAAAGGRKGKGKAGDGKKRATAAAQEEKQAVA
AAAAATVAAADAKKKKAGGIGSFFGKASAAPIAAAKNEKEDEEGGVGAED
VQPPQQQQQQPKARLSKKMVVEEDDDEEEDEVVPRKGGDTDGGAGGGASE
GEGDGLEDSEEEWDDGNAAKSETPSKTNGVGVGSSGSSSISSSSKKASAA
TGPAAAKNTKATAPPTAATSAAKKAKKAKKAKKDRSKASPVGDDGSDDEA
GGREEAESTPGSGAATIGRGKAKKAGRGSGAKGGSGSEVGSGKSDDEEGD
GEKKKRRRGKGTAVSTSAKRKGRYDSDDEEEETSKKEPVRGAMDKFTAKD
NGTGVDSNGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEALQPA
KTNQTRTPPQGMKKAKIGVENKAEGSVETPASANGKDGATATKKKTAKAA
PKSGGKQASMMSFFKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019038POLD3
IPR041913POLD3_sf