prot_Ecto-sp13_S_contig7671.18901.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7671.18901.1
Unique Nameprot_Ecto-sp13_S_contig7671.18901.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 8.690e-104
Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPWDMEWRKRNGIEQPVHNRRRTPPKKKW 147
            MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRP+TKMDRIASTHERSNPWDMEWR RNGIEQPVHNRRRTPPKKKW
Sbjct:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDMEWRNRNGIEQPVHNRRRTPPKKKW 147          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.400e-25
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPWDME 124
            M FYQ + T + RT P  LT ++RR    +LE+GG+VR V NHGV+ L YRF ++  +   ++R+ + GRW S Y+DA P    K++  L  +D  +R +T +P  KM+ I++ H+ +NPW+ +
Sbjct:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHK-TNPWERD 123          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 5.740e-21
Identity = 44/121 (36.36%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 121
            MVFY+ ++T +     T LT + +  ++ ++E GG+VR+V NHG+R LP+RF +K+  KE  +R++  GR+ S +YDASP V  K+E ++  +D+++R +  +   K+  I    E+ NP+
Sbjct:    1 MVFYECVLTAKNTAPFTSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYPDKE-GNRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 9.030e-21
Identity = 41/121 (33.88%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 121
            MVFY+ ++T +   +   LTN  +  +++++E GG+VR+V NHG+R LP+RF +++  KE  +R++  GR+ S +YDASP    ++E ++  +D+++R +  +   K+  I + +E+ NP+
Sbjct:    1 MVFYECVLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYPDKE-GNRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A1E7FMF6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMF6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 8.950e-20
Identity = 43/121 (35.54%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 121
            MVFY+ +++ +  T+   LT + ++ +  ++E GG+VRS+ NHG+R  P+RF +K+       R++  GR+ S YYD++P   K++E  L   D+V+RV+  +  +K+D I   HE+ NP+
Sbjct:    1 MVFYECVLSTKHTTHFKALTALMKQVSLKVVENGGIVRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISIYYDSNPTTLKQVETVLTMNDQVLRVTHLKSRSKLDWINYKHEK-NPY 120          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A7S1YM88_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM88_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.070e-19
Identity = 43/121 (35.54%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 121
            MVFY+ ++T +       LT++ +  +  ++E GG+VRSV NHG+R L +RF ++H  ++   R F  GR+ S YYD+SPA+ +++ E L  ++ V+R +  R   K+D I + +++ NP+
Sbjct:    1 MVFYECVITAKNTAPFYQLTSLMKEISLKVVENGGIVRSVQNHGIRDLAHRFRARHPDRD-GTRLFQKGRFISVYYDSSPAIQEEVGEILVMDENVLRATHLRARNKLDTINNPYQKKNPY 120          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.220e-19
Identity = 43/121 (35.54%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 121
            MVFY+ ++T +      +LTN+ +  +  ++E GG+VRSV NHG+R LP+RF +K+  KE  +R++  GR+ S +YDASP   ++++  L  +++V+R +  +P  K+      +E+ NP+
Sbjct:    1 MVFYECVLTAKNTAPFMNLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYPDKE-GNRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: K0TLA5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLA5_THAOC)

HSP 1 Score: 88.6 bits (218), Expect = 2.570e-19
Identity = 43/121 (35.54%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 121
            MVFY+ ++T +  T+   LT++ +  +  I+E GG+VRS+ NHG+R LP+RF SK+  +E  +R++  GR+ S +YD++P  AK++E  L   ++++R +  R S + + +    E  NP+
Sbjct:   39 MVFYECLMTAKNTTHYNLLTSLMKEVSHKIVENGGIVRSIQNHGIRQLPHRFKSKYADRE-GNRYYEKGRFISVFYDSNPVTAKQVETILNLNEEILRNTHLRASNRFNEVNDLLESRNPY 158          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A7S2MAY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAY0_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.110e-18
Identity = 41/124 (33.06%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPWDME 124
            MVFY+ ++T +   +  +LT + +  +  I+  GG+VRS+ NHGVR LP+RF +K+  +E  +R++  GR+ S +YDASP + +++E  L  +++++R +  +   K   + +  E  NP+  E
Sbjct:    1 MVFYECLMTAKNTAHYNNLTALMKDISLKIVNNGGIVRSIQNHGVRQLPHRFRAKYADRE-GNRYYEKGRFVSVFYDASPGIMRQVEGILNLDEQILRNTHLKGRNKFMDVNNVREAKNPYIQE 123          
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Match: A0A7R9ZLT6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLT6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.760e-17
Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 0
Query:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPSTKMDRIASTHERSNPW 121
            MVFY+ ++T +   +   LT++ ++ A  ++E GG+VRSV NHG+R  P ++ +K+       R F  GR+ S YYDA+P   K ++  L  +D+V+R +  +  +KMD I       NP+
Sbjct:    1 MVFYECLITTKNTAHFNALTSLVKQVAHTVVEGGGIVRSVQNHGIRQFPQKYKAKYPDFVTGQRAFDKGRFFSIYYDANPRTQKDVDILLSRDDQVLRRTHLKARSKMDFITIQRPDRNPY 121          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7671.18901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LLJ6_ECTSI8.690e-10498.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0N7_9STRA2.400e-2539.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2IGM9_9STRA5.740e-2136.36Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6S8YXD6_9STRA9.030e-2133.88Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FMF6_9STRA8.950e-2035.54Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1YM88_9STRA1.070e-1935.54Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6T7JZ88_9STRA2.220e-1935.54Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
K0TLA5_THAOC2.570e-1935.54Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2MAY0_9STRA6.110e-1833.06Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7R9ZLT6_9STRA5.760e-1734.71Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..127
e-value: 2.4E-20
score: 74.5
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 4..101
e-value: 1.8E-16
score: 60.2
IPR000529Ribosomal protein S6PANTHERPTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6coord: 1..120
NoneNo IPR availablePANTHERPTHR21011:SF128S RIBOSOMAL PROTEIN S6, MITOCHONDRIALcoord: 1..120
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 1..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7671contigEcto-sp13_S_contig7671:934..3288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7671.18901.1mRNA_Ecto-sp13_S_contig7671.18901.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7671 431..4344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7671.18901.1 ID=prot_Ecto-sp13_S_contig7671.18901.1|Name=mRNA_Ecto-sp13_S_contig7671.18901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPY
RFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVS
TRRPSTKMDRIASTHERSNPWDMEWRKRNGIEQPVHNRRRTPPKKKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR000529Ribosomal_S6
IPR035980Ribosomal_S6_sf