prot_Ecto-sp13_S_contig7614.18822.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7614.18822.1
Unique Nameprot_Ecto-sp13_S_contig7614.18822.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length402
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7614.18822.1 vs. uniprot
Match: D7FP53_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP53_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 1.000e-137
Identity = 312/409 (76.28%), Postives = 320/409 (78.24%), Query Frame = 0 
Query:    1 MAERKTQDQANRRVVPLGSDGEAAEARTTSGRRSSDKLRIRSHSLGRDRQARRRVTPLGEDESEEARERGVPVPAVGLPPEEPPYXXXXXXXXXXXXXXXXXXXXXXGAAGANIHGQQESPVTFTRNAFVAEQLEHLARAVSSIPSSPAVGQEAGWWADRTPGAGGNNN-------PHMGSATPVFLLQSPASHLYRQLRSTPSTASNTEASGSSSRPLSHSGGAXXXXXXXXXXXXXXXXXXXXXTPPRLGSAPTSGGILQSPRGERGAGAAAPTALAAGSAAGXXXXXXPGVRXXXXXXXXXXXXGAEREASWSQGSTIQEYLVAQLQQLSQLLDSPPPRREVGPQTGATLPEVAVAVAPEEERRRSGKRSLERAGSGGSSLQYSLSAASSRSGSPFSLDGTTAAMA 402
            MAERKTQDQANRRVVPLGSDGE AEAR T+GRR+SDKLRI+SHSLGR+RQARRRVTPLGEDESEEARERGVPVPAVGLP EEPP+  XXXXXXXXXXXXXXXXXXXX    A+  GQQESP TFTRNAFVAEQL+HLARAVSSIPSSPAVGQEAGWW DR                PH GSA PVFLLQSPASHLYRQLRSTPSTASNTEASGSSSRPLSHSG  XXXXXXXXXXXXXXXXXXXXX                                       XXXX  PGVR            GAEREA WSQGST+QEYLVAQLQQLSQLLDSPPPRRE GPQTGATLPEVAVAVAPEEERRRS KRSLERAGSGGSSLQYSLSAASSRSGSPFSLDGTTAAMA
Sbjct:    1 MAERKTQDQANRRVVPLGSDGEVAEARATTGRRNSDKLRIKSHSLGRERQARRRVTPLGEDESEEARERGVPVPAVGLPREEPPHPGXXXXXXXXXXXXXXXXXXXXXXXXASTSGQQESPATFTRNAFVAEQLKHLARAVSSIPSSPAVGQEAGWWGDRXXXXXXXXXXXXXXXXPHTGSAPPVFLLQSPASHLYRQLRSTPSTASNTEASGSSSRPLSHSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPGVRAAPSPAGPPGVGGAEREAFWSQGSTVQEYLVAQLQQLSQLLDSPPPRREAGPQTGATLPEVAVAVAPEEERRRSVKRSLERAGSGGSSLQYSLSAASSRSGSPFSLDGTTAAMA 409
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BLAST of mRNA_Ecto-sp13_S_contig7614.18822.1 vs. uniprot
Match: A0A6H5KYP8_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP8_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 2.200e-103
Identity = 224/295 (75.93%), Postives = 231/295 (78.31%), Query Frame = 0 
Query:  108 GAAGANIHGQQESPVTFTRNAFVAEQLEHLARAVSSIPSSPAVGQEAGWWADRTPGAGGNNNPHMGSATPVFLLQSPASHLYRQLRSTPSTASNTEASGSSSRPLSHSGGAXXXXXXXXXXXXXXXXXXXXXTPPRLGSAPTSGGILQSPRGERGAGAAAPTALAAGSAAGXXXXXXPGVRXXXXXXXXXXXXGAEREASWSQGSTIQEYLVAQLQQLSQLLDSPPPRREVGPQTGATLPEVAVAVAPEEERRRSGKRSLERAGSGGSSLQYSLSAASSRSGSPFSLDGTTAAMA 402
            GAAGA+IHGQQESPVTFTRNAFVAEQL+HLARAVSSIPSSPAVGQE GWW DRT G GG+NNPHMGSA PVFLLQSPASHLYRQLRSTPSTASNTEASGSSSRPLSHSG  XXXXXXXXXXXXXXXXXXXXX                                       XXX   PGV             GAEREASWSQGST+QEYLVAQLQQLSQLLDSPPPRRE GP+TG+TLPE+AVAVAPEEERRRSGKRSLERAGSGGSSLQYSLS ASSRSGSPFSLDGTTAAMA
Sbjct:   64 GAAGADIHGQQESPVTFTRNAFVAEQLKHLARAVSSIPSSPAVGQEVGWWGDRTAGGGGDNNPHMGSAPPVFLLQSPASHLYRQLRSTPSTASNTEASGSSSRPLSHSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGPGVHAAPSPAGPPGIGGAEREASWSQGSTVQEYLVAQLQQLSQLLDSPPPRREAGPKTGSTLPELAVAVAPEEERRRSGKRSLERAGSGGSSLQYSLSTASSRSGSPFSLDGTTAAMA 358
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7614.18822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP53_ECTSI1.000e-13776.28Cellulose synthase (UDP-forming), family GT2 n=1 T... [more]
A0A6H5KYP8_9PHAE2.200e-10375.93GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7614contigEcto-sp13_S_contig7614:2..3804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7614.18822.1mRNA_Ecto-sp13_S_contig7614.18822.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7614 2..3804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7614.18822.1 ID=prot_Ecto-sp13_S_contig7614.18822.1|Name=mRNA_Ecto-sp13_S_contig7614.18822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=402bp
MAERKTQDQANRRVVPLGSDGEAAEARTTSGRRSSDKLRIRSHSLGRDRQ
ARRRVTPLGEDESEEARERGVPVPAVGLPPEEPPYPGQPGSNGGGSGGGV
GGVDSGDGAAGANIHGQQESPVTFTRNAFVAEQLEHLARAVSSIPSSPAV
GQEAGWWADRTPGAGGNNNPHMGSATPVFLLQSPASHLYRQLRSTPSTAS
NTEASGSSSRPLSHSGGAASPNERAAAAAAAAVTLDATTTPPRLGSAPTS
GGILQSPRGERGAGAAAPTALAAGSAAGGGGAGGPGVRAAPSPAGPSGVG
GAEREASWSQGSTIQEYLVAQLQQLSQLLDSPPPRREVGPQTGATLPEVA
VAVAPEEERRRSGKRSLERAGSGGSSLQYSLSAASSRSGSPFSLDGTTAA
MA
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