prot_Ecto-sp13_S_contig7561.18759.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7561.18759.1
Unique Nameprot_Ecto-sp13_S_contig7561.18759.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length246
Homology
BLAST of mRNA_Ecto-sp13_S_contig7561.18759.1 vs. uniprot
Match: D7FSM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM2_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 1.870e-156
Identity = 222/232 (95.69%), Postives = 225/232 (96.98%), Query Frame = 0
Query:    1 MTVANSQLWLDISAARPAARREHRRRAAVVENTWAGSRSCILTVGLAYHLSTFDAQGLADMLNSEEKSTERMAGTKEWHEKGFRLHWDPVRRRFTIFNVSRRSFVLRGACSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPILRSLQRRRRRRSAIGCPGQSEDGSSLVGTAVLDSAEV 232
            MT+AN+QLWLDISAARPAARRE RRRAAVVENTWAGSRSCILTVGLAYHLSTFDAQGLADMLNSEE STERMAGTKEWH+KGFRLHWDPVRRRFTI NVSRRSFVLRG CSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPILRS QRRRRRRSAIGC GQSEDGSSLVGTAVLDSAE 
Sbjct:  155 MTLANNQLWLDISAARPAARREQRRRAAVVENTWAGSRSCILTVGLAYHLSTFDAQGLADMLNSEETSTERMAGTKEWHDKGFRLHWDPVRRRFTILNVSRRSFVLRGGCSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPILRSQQRRRRRRSAIGCAGQSEDGSSLVGTAVLDSAET 386          
BLAST of mRNA_Ecto-sp13_S_contig7561.18759.1 vs. uniprot
Match: A0A6H5JHV6_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV6_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 7.630e-148
Identity = 217/223 (97.31%), Postives = 220/223 (98.65%), Query Frame = 0
Query:   13 SAARPAARREHRRRAAVVENTWAGSRSCILTVGLAYHLSTFDAQGLADMLNSEEKSTERMAGTKEWHEKGFRLHWDPVRRRFTIFNVSRRSFVLRGACSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPILRSLQRRRRRRSAIGCPGQSEDGSSLVGTAVLDSAEVSRC 235
            SAARPAARREHRRRAAVV+NTWAGSRSCILTVGLAYHLSTFDAQGLADMLNSEEKSTERMAGTKEWHEKGFRLHWDPVRRRFTI NVSRRSFVLRGACSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGP LRSLQRRRRRRS+IGC GQSEDG+SLVGTAVLDSAEVSRC
Sbjct:  521 SAARPAARREHRRRAAVVDNTWAGSRSCILTVGLAYHLSTFDAQGLADMLNSEEKSTERMAGTKEWHEKGFRLHWDPVRRRFTILNVSRRSFVLRGACSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPTLRSLQRRRRRRSSIGCAGQSEDGASLVGTAVLDSAEVSRC 743          
BLAST of mRNA_Ecto-sp13_S_contig7561.18759.1 vs. uniprot
Match: A0A836CKS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS8_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.540e-21
Identity = 68/186 (36.56%), Postives = 87/186 (46.77%), Query Frame = 0
Query:   34 WAGSRSCILTVGLAYHLSTFDAQGLADMLNS----------------------------EEKSTERMAGTKEWHEKGFRLHWDPVRRRFTIFNVSRR---SFVLRGACSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGITGDTVPLPLLRPHWMRIVWGPPAMEITRG-GELRVQVW 187
            W  S    + VG A HLST+DAQGLAD LN                             +    E  AG   W   G R HWD   RRFT+++ +R    +FVL GA S+LA  LLGF  +D+ S  +++A L          R   + GD  P PL  P W  +VWGP A+E+ R  G L V+VW
Sbjct:  527 WPRSEEVRVEVGRAMHLSTYDAQGLADALNGAAXXXXXXXXXXXXXXXXXXXXXXXXXRQNPIAEGFAG---WRAAGLRCHWDARARRFTLYSTARAHVAAFVLHGARSTLAARLLGFAPRDYASA-LSDAPLPLGGDGGGAARCQCVVGDAAPAPLDSPKWFEVVWGPSALELLRAPGTLEVEVW 708          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7561.18759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSM2_ECTSI1.870e-15695.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHV6_9PHAE7.630e-14897.31C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CKS8_9STRA5.540e-2136.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7561contigEcto-sp13_S_contig7561:3120..7024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7561.18759.1mRNA_Ecto-sp13_S_contig7561.18759.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7561 307..7024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7561.18759.1 ID=prot_Ecto-sp13_S_contig7561.18759.1|Name=mRNA_Ecto-sp13_S_contig7561.18759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
MTVANSQLWLDISAARPAARREHRRRAAVVENTWAGSRSCILTVGLAYHL
STFDAQGLADMLNSEEKSTERMAGTKEWHEKGFRLHWDPVRRRFTIFNVS
RRSFVLRGACSSLATALLGFREKDHFSKPVAEAVLDPQHPSDPPRRHMGI
TGDTVPLPLLRPHWMRIVWGPPAMEITRGGELRVQVWSRQPTGPILRSLQ
RRRRRRSAIGCPGQSEDGSSLVGTAVLDSAEVSRCLGGAYWTKDT*
back to top