prot_Ecto-sp13_S_contig7348.18513.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7348.18513.1
Unique Nameprot_Ecto-sp13_S_contig7348.18513.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length871
Homology
BLAST of mRNA_Ecto-sp13_S_contig7348.18513.1 vs. uniprot
Match: A0A6H5JBA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA9_9PHAE)

HSP 1 Score: 1155 bits (2989), Expect = 0.000e+0
Identity = 753/870 (86.55%), Postives = 765/870 (87.93%), Query Frame = 0
Query:    1 QDESEDDSRTYSITSGEEDDGHVNSDETDPPLRGEQDGFDGGGXXXXXXXSGKSFDSDIHFTVQETQAILRVMEGLGCGTTTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGRVESIPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLAVEGVGGGFGKGIGDDTRNNFASVVAKRLAEHGRAHYNVATGTSRTDVATTSALDGGDRAGPGRSRRGPAVATGGRGAAADVAVRGVPYAVSIYRDSSDSESDGGVMEVTAPPGASATADAXXXXXXXXXXXXXXXXXGREERSEPRRSLALRVDLDAVRAARKVPKHAIGTGGGERNTPSGSGESXXXXXXXXXXXXXXXXXXXXXXXDYFAGDSDSCSPRDSSPPSMFRLLSRPTGGAPDVAGFARLREHHTRQRPSTTVALALNTDAKGQRHPAKSFKAAAGGGTAAGGSVVGYGWQGASPRRGAPGSARPAVEAAAAVVAAEAQKIAEPERATTASRGGVGVTATRRVIPGPRPAARLARKHGAMAGLSPPPPSQAGSVPTPAVTSETSGAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAMPREFSPGDVCGSGTTAAEPXXXXXXXXXXGEKRYADACCGTEAGFTTVTVAESVTESKPEYTPESDEPTTKRSGEGSREEDLQAGTLRSGDLDRRDACYKHGPAVPGKDGVGPGAQRKGRGDEXXXXXXXXATRSKPVFFASSXXXXXXXXXXXXXXXSLHXXXXXXXXXXXXXXXXXXXXXXDRECDHSTRAAAVPAVAPAKPVNVPAAEAERGRLLYEQVIRMGGAAQPKMSPVRRLPKRRPRVVYESLW 870
            +DESEDDSRTYSITSGEEDDGHVNSDETDPPLRGEQD FDGGGXXXXX  SGKSFDSDIHFTVQETQAILRVME LGCG TTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGR ES+PPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNN RLAVEGVGGGFGKGIGDDTRNNFASVVA+RLAEHGRAH N ATGTSRTDVA TSAL GGDR GPGRSRRGPA ATGGRGAAADVAVRG  +AVSIYRDSSDSESDGGVMEVTAPPGASA AD    XXXXXXXXXXXXX GR ERSEPRRSLALRVDLDAVRAARKVPKHAI TGGGE NTPSG  E XXXXXXXXXXXXXXXXXXXXXXX   AGDSDSCSPR SSPPSMFR LSRPTGGAPDVAGFARLREHHTRQRPSTTVALALNTD KGQRHPAKSFKAAAG G+A GGSVVGYGWQGASPRRGAPGSARPAVEAAAAVVAAEA+KIAEPERATTASRG V VTATRR IP PRPAARLARKHG MAGLSPPPPSQAGS+PTPA  SETS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAMPREFSPGDVCGSGT AAEP          GEKRYADACCGTEAGFTT  VAES TESKPEYTPESDE T   SGEGSRE+DLQAGTLRSGDLDRR ACYKHG AV GKDGVGPG QRKGRGDE        ATRSK VFFASSXXXXXXXXXX     SL+   XXXXXXX            DR   HSTR A VPA APA+P+NVPAA AERGRLLYEQVIRMGGAAQPKMSP+R LPKRRPRVVYESLW
Sbjct:  217 EDESEDDSRTYSITSGEEDDGHVNSDETDPPLRGEQDFFDGGGXXXXXPSSGKSFDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESVPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNERLAVEGVGGGFGKGIGDDTRNNFASVVARRLAEHGRAHNNAATGTSRTDVAATSALVGGDRGGPGRSRRGPAAATGGRGAAADVAVRGASHAVSIYRDSSDSESDGGVMEVTAPPGASAIADTASAXXXXXXXXXXXXX-GRGERSEPRRSLALRVDLDAVRAARKVPKHAIWTGGGEGNTPSGF-EEXXXXXXXXXXXXXXXXXXXXXXXXXXAGDSDSCSPRSSSPPSMFRPLSRPTGGAPDVAGFARLREHHTRQRPSTTVALALNTDTKGQRHPAKSFKAAAGRGSAVGGSVVGYGWQGASPRRGAPGSARPAVEAAAAVVAAEAKKIAEPERATTASRGRVRVTATRR-IPAPRPAARLARKHGVMAGLSPPPPSQAGSMPTPAAKSETS---EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAMPREFSPGDVCGSGTKAAEPSAAAAA----GEKRYADACCGTEAGFTTAAVAESATESKPEYTPESDEATATSSGEGSREQDLQAGTLRSGDLDRRHACYKHGAAVLGKDGVGPGPQRKGRGDERRSGEQQ-ATRSKRVFFASSXXXXXXXXXXDKGTGSLYHQGXXXXXXXEF----------DR---HSTRPAVVPAPAPAEPMNVPAAGAERGRLLYEQVIRMGGAAQPKMSPLRPLPKRRPRVVYESLW 1062          
BLAST of mRNA_Ecto-sp13_S_contig7348.18513.1 vs. uniprot
Match: D7FQW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW5_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 1.750e-131
Identity = 224/245 (91.43%), Postives = 228/245 (93.06%), Query Frame = 0
Query:    1 QDESEDDSRTYSITSGEEDDGHVNSDETDPPLRGEQDGFDGGGXXXXXXXSGKSF--DSDIHFTVQETQAILRVMEGLGCGTTTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGRVESIPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLAVEGVGGGFGKGIGDDTRNNFASVVAKRLAEHGRAHYNVATGTSRTDVATTSALDGG 243
            +DESEDDSRTYSITSGEED+GHVNSDETDPPLRGEQDGFDGG XXXXXXX       DSDIHFTVQETQAILRVME LGCG TTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGR ESIPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLA+EGVGGG GKGIGDDTRNNFASVVA+RLAEHGRAHYNVA G SRT VA TSAL GG
Sbjct:  203 EDESEDDSRTYSITSGEEDEGHVNSDETDPPLRGEQDGFDGGXXXXXXXXXXXXXXSDSDIHFTVQETQAILRVMERLGCGATTLARFASFTLEDWMDEVCDPIIQDLRGSQSYRASGLDARHRFGREESIPPLKRYISAELYPASTALLRDALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLAIEGVGGGVGKGIGDDTRNNFASVVARRLAEHGRAHYNVADGASRTGVAATSALVGG 447          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7348.18513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBA9_9PHAE0.000e+086.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQW5_ECTSI1.750e-13191.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7348contigEcto-sp13_S_contig7348:1004..5117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7348.18513.1mRNA_Ecto-sp13_S_contig7348.18513.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7348 1004..5117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7348.18513.1 ID=prot_Ecto-sp13_S_contig7348.18513.1|Name=mRNA_Ecto-sp13_S_contig7348.18513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=871bp
QDESEDDSRTYSITSGEEDDGHVNSDETDPPLRGEQDGFDGGGDGGGGPG
SGKSFDSDIHFTVQETQAILRVMEGLGCGTTTLARFASFTLEDWMDEVCD
PIIQDLRGSQSYRASGLDARHRFGRVESIPPLKRYISAELYPASTALLRD
ALPARVRRRAFVNTAAAMRGEAEDPFCSVLGNNGRLAVEGVGGGFGKGIG
DDTRNNFASVVAKRLAEHGRAHYNVATGTSRTDVATTSALDGGDRAGPGR
SRRGPAVATGGRGAAADVAVRGVPYAVSIYRDSSDSESDGGVMEVTAPPG
ASATADAASAAVAAAVAAASAAAAGREERSEPRRSLALRVDLDAVRAARK
VPKHAIGTGGGERNTPSGSGESSSSSDNSSSSGGCRSGDEEDDDEDYFAG
DSDSCSPRDSSPPSMFRLLSRPTGGAPDVAGFARLREHHTRQRPSTTVAL
ALNTDAKGQRHPAKSFKAAAGGGTAAGGSVVGYGWQGASPRRGAPGSARP
AVEAAAAVVAAEAQKIAEPERATTASRGGVGVTATRRVIPGPRPAARLAR
KHGAMAGLSPPPPSQAGSVPTPAVTSETSGAVSASSAAADAAAAAPKAPV
EAAAVAAAAVAAVTTVAMPREFSPGDVCGSGTTAAEPSSSSAAAAAAGEK
RYADACCGTEAGFTTVTVAESVTESKPEYTPESDEPTTKRSGEGSREEDL
QAGTLRSGDLDRRDACYKHGPAVPGKDGVGPGAQRKGRGDERRRRGEQQA
TRSKPVFFASSSSGDSSASASGRGTGSLHHQGGGGGGGGGGGDGRRRRGG
GDRECDHSTRAAAVPAVAPAKPVNVPAAEAERGRLLYEQVIRMGGAAQPK
MSPVRRLPKRRPRVVYESLW*
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