prot_Ecto-sp13_S_contig7326.18493.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7326.18493.1
Unique Nameprot_Ecto-sp13_S_contig7326.18493.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.820e-72
Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0
Query:    1 EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLFYNPQE 110
            EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHE DRLQEFKSTDFGDMFDLRKY+E VSLMTGKFSYLFYNPQE
Sbjct:    3 EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A024UW39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.730e-23
Identity = 49/101 (48.51%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            PRVN A+L+QF+G+TV +VG + S+    S+A L+TSD   +TV    G+ ++S+YVEVIG +     L+EFK T FGD FDL+ Y+++V L+ GK+S LF
Sbjct:    8 PRVNKAILAQFVGHTVSLVGSIESWT--GSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A485KWY3_9STRA (Aste57867_12966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWY3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.020e-22
Identity = 48/101 (47.52%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            PRVN AV++Q++G TV +VG + S+    S A ++TSDGA +TV    G+ +TS++VEVIG +     LQE+K T FGD FDL+ Y+++V L+ GKF+ +F
Sbjct:    8 PRVNKAVMAQYIGRTVALVGSLESWT--GSMAVIKTSDGALVTVHPQPGADYTSKFVEVIGLVKPDGSLQEYKCTSFGDDFDLKNYDKLVHLIHGKFATMF 106          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A6G0XXL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 8.060e-22
Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            PRVN A+++QF+G TV +VG + S+    S A ++TSDG  +TV    G+ ++S++VEVIG +     L+E+K T FGD FDL+ Y+++V L+ GKFS LF
Sbjct:    8 PRVNKAIMAQFVGRTVALVGSLESWT--GSMAVVKTSDGGLVTVHPQPGADYSSKFVEVIGLVQPDGSLKEYKCTSFGDDFDLKNYDKLVHLIHGKFSSLF 106          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A8K1C3J4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL)

HSP 1 Score: 85.5 bits (210), Expect = 2.390e-19
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            PRVN   +  F+G TV +VG V S+    +   L TSDG  + V    GS ++S++VEVIG + + + LQEFK+T FGD FDL  Y++ V +   KF +LF
Sbjct:   12 PRVNKKTMGSFVGRTVAIVGAVESHMP--TAVVLRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A662XQN3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQN3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.350e-18
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    5 PRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            PRVN   +  ++G TV +VG V S+    + A L TSDG  + V+   GS + S+ VEVIG + +T+ +QEFK+T FGD FDL  Y+++V L   KF  LF
Sbjct:   61 PRVNKKTMGAYVGRTVALVGAVESHTP--TAAVLRTSDGEIVNVKPQPGSNYGSKVVEVIGRVVDTETIQEFKATPFGDDFDLENYDQLVQLAQTKFRQLF 159          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A484EA13_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA13_BRELC)

HSP 1 Score: 81.3 bits (199), Expect = 1.070e-17
Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            +PRVN   +  ++G+TV VVG V  +    +   L TSDG  + V    GS + S+ VEVIG + +++ LQEFK+T FGD FDL  Y++ V L   K+ YLF
Sbjct:   10 SPRVNKTTMGGYVGHTVAVVGTVEKHSP--TAVVLRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSETLQEFKTTLFGDNFDLDVYDQFVQLSHSKYKYLF 109          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A225WD33_9STRA (Uncharacterized protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A225WD33_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.610e-17
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            +PRVN   +  ++G+TV +VG V S+    +   L TSDG  + V    GS + S+ VEVIG + +T+ +QEFK+T FGD FDL  Y++ V L   K+  LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHSP--TAVVLRTSDGEIVNVTPQPGSDYGSKVVEVIGRVVDTETIQEFKTTLFGDNFDLDVYDQFVQLSQSKYKQLF 112          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: H3H303_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H303_PHYRM)

HSP 1 Score: 79.3 bits (194), Expect = 6.610e-17
Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            +PRVN   +  ++G+TV +VG V S+    +  +L TSDG  + V    G+ + S+ VEVIG + +++ +QEFK+T FGD FDL  Y++ V L   K+ +LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHTP--TAVKLRTSDGGIVNVTPQPGTDYGSKVVEVIGRVTDSESIQEFKTTLFGDNFDLDVYDQFVQLAQSKYKHLF 112          
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Match: A0A0P1B2V0_PLAHL (Metal-dependent amidohydrolase 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2V0_PLAHL)

HSP 1 Score: 84.7 bits (208), Expect = 7.380e-17
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    4 TPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGKFSYLF 105
            +PRVN   +S+++G TV +VG V S++   +   L TSDG  + V    GS + S++VEVIG + +++ +QEFK+T FGD FDL  Y+  V L T K+ +LF
Sbjct:  548 SPRVNKKTMSEYIGTTVALVGAVESHRP--TAVVLRTSDGGIVNVTPQPGSDYGSRFVEVIGRVIDSETIQEFKTTLFGDNFDLDVYDNFVQLSTTKYKHLF 647          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7326.18493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA2_ECTSI1.820e-7297.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024UW39_9STRA1.730e-2348.51Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A485KWY3_9STRA1.020e-2247.52Aste57867_12966 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XXL0_9STRA8.060e-2246.53Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1C3J4_PYTOL2.390e-1943.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XQN3_9STRA3.350e-1844.55Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A484EA13_BRELC1.070e-1743.14Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A225WD33_9STRA6.610e-1742.16Uncharacterized protein n=9 Tax=Peronosporaceae Ta... [more]
H3H303_PHYRM6.610e-1740.20Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0P1B2V0_PLAHL7.380e-1743.14Metal-dependent amidohydrolase 3 n=1 Tax=Plasmopar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013970Replication factor A protein 3PFAMPF08661Rep_fac-A_3coord: 3..98
e-value: 2.2E-19
score: 69.7
NoneNo IPR availableGENE3D2.40.50.140coord: 1..108
e-value: 3.5E-31
score: 109.4
NoneNo IPR availablePANTHERPTHR15114FAMILY NOT NAMEDcoord: 3..106
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 3..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7326contigEcto-sp13_S_contig7326:517..6242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7326.18493.1mRNA_Ecto-sp13_S_contig7326.18493.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7326 517..6242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7326.18493.1 ID=prot_Ecto-sp13_S_contig7326.18493.1|Name=mRNA_Ecto-sp13_S_contig7326.18493.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
EFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQM
TAGSTWTSQYVEVIGHLHETDRLQEFKSTDFGDMFDLRKYNEVVSLMTGK
FSYLFYNPQE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013970Rfa2
IPR012340NA-bd_OB-fold