prot_Ecto-sp13_S_contig7275.18424.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7275.18424.1
Unique Nameprot_Ecto-sp13_S_contig7275.18424.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7275.18424.1 vs. uniprot
Match: A0A6H5K079_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K079_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.580e-46
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 0 
Query:   20 VSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLHDGAPRMGAGGAGGGTDWGHILSRRRS 102
            VSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLHDGAPRMGAGGAGG  DWGH+LSRRRS
Sbjct: 1071 VSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLHDGAPRMGAGGAGGRADWGHVLSRRRS 1153
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BLAST of mRNA_Ecto-sp13_S_contig7275.18424.1 vs. uniprot
Match: D7FSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ0_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.200e-44
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 
Query:   20 VSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLHDGAPRMGAGGAGGGTDWGHILSR 99
            VSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLH GAPRMGAGGAGGG DWGHIL R
Sbjct:  741 VSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLHHGAPRMGAGGAGGGADWGHILPR 820
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BLAST of mRNA_Ecto-sp13_S_contig7275.18424.1 vs. uniprot
Match: A0A835YHQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.500e-7
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:   21 SEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTL 65
            SEV F+THL+FS  LP  ++ +A R+ +GPLHILQEL+ VV+RTL
Sbjct:  455 SEVYFYTHLSFSENLPALEDAQASRYLLGPLHILQELRRVVDRTL 499
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7275.18424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K079_9PHAE1.580e-4696.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSJ0_ECTSI1.200e-4496.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YHQ7_9STRA1.500e-760.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7275contigEcto-sp13_S_contig7275:3485..4685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7275.18424.1mRNA_Ecto-sp13_S_contig7275.18424.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7275 3483..4685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7275.18424.1 ID=prot_Ecto-sp13_S_contig7275.18424.1|Name=mRNA_Ecto-sp13_S_contig7275.18424.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
GRRRRALAKGGDEGGGGGGVSEVTFFTHLTFSAYLPDFQEMEACRHFVGP
LHILQELKWVVERTLGSFQEDDEVLHDGAPRMGAGGAGGGTDWGHILSRR
RSSRSERRSS
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