prot_Ecto-sp13_S_contig7249.18384.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7249.18384.1
Unique Nameprot_Ecto-sp13_S_contig7249.18384.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length417
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7249.18384.1 vs. uniprot
Match: A0A6H5JRB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB1_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 6.240e-24
Identity = 109/143 (76.22%), Postives = 112/143 (78.32%), Query Frame = 0 
Query:  281 LDEAGLL--RCSSTGLDSA----AGGGHLSVLEWMLDHKAHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHASGICRASLANLDEVARGGQLRALIWLSERGARASTSAVDRAAEAGHLG 417
            L E GL+  RC   G  S     AGGGHLSVL+WMLDHKAHH             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX H SGICRASLANLDEVAR GQLRALIWL+ER ARASTSAVDRAAEAGHLG
Sbjct:   66 LIEVGLVFGRCERGGHVSRILDRAGGGHLSVLQWMLDHKAHHRCSSNAYGLAASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHDSGICRASLANLDEVAREGQLRALIWLNERDARASTSAVDRAAEAGHLG 208
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BLAST of mRNA_Ecto-sp13_S_contig7249.18384.1 vs. uniprot
Match: D7FH20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH20_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 6.670e-18
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0 
Query:  368 HASGICRASLANLDEVARGGQLRALIWLSERGARASTSAVDRAAEAGHLG 417
            HASGICRASLANLDEVAR GQLRALIWLSERGARASTSAVDRAAEAGHLG
Sbjct:  207 HASGICRASLANLDEVAREGQLRALIWLSERGARASTSAVDRAAEAGHLG 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7249.18384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRB1_9PHAE6.240e-2476.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH20_ECTSI6.670e-1898.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 286..385
e-value: 4.2E-10
score: 41.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 137..285
e-value: 5.2E-17
score: 63.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 153..373
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 153..229
e-value: 9.4E-8
score: 32.5
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 19..278
coord: 277..416

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7249contigEcto-sp13_S_contig7249:990..6077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7249.18384.1mRNA_Ecto-sp13_S_contig7249.18384.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7249 990..6077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7249.18384.1 ID=prot_Ecto-sp13_S_contig7249.18384.1|Name=mRNA_Ecto-sp13_S_contig7249.18384.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=417bp
MSSSSVAPAATAASREGCGKTTVVGALLSRVLATPGLLEACTAYQHGDSF
LSYDDGDLAAAQGHLSLLRLRHALRREGKREETGHDSKVSHGFCGRSRSR
SGITDAEENSGRGEEDQGESHPLLPAKDEEDVGREGDGPLLDDLKFSHRA
ADWAAAQGHLEVVRWLLENRDEGCTESAVDGACWNGHEATVRWLVCGRKQ
AGSERALDYAASTGRIELVKWLSRRPGSTCTLAAMDGAAGGGYLDVVRWL
AGNRQEGCSQAAFEMAASKGHLDVIKRLQWLDEAGLLRCSSTGLDSAAGG
GHLSVLEWMLDHKAHHRCSSNAYGLAASRGHLDVCEWLQLWMPDLRCPAW
AAEAAAAAGHLEVVRWLHASGICRASLANLDEVARGGQLRALIWLSERGA
RASTSAVDRAAEAGHLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom