prot_Ecto-sp13_S_contig7241.18374.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7241.18374.1
Unique Nameprot_Ecto-sp13_S_contig7241.18374.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7241.18374.1 vs. uniprot
Match: A0A6H5JA28_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA28_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 4.660e-11
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:   23 LRKYDEHKAQLCLADEELRPALRAGFMEFTELKRRLPQVDEAS 65
            + K DE KAQLCLADEE RPAL+A F EFTELK R PQVDE S
Sbjct:  302 ISKNDEQKAQLCLADEEQRPALKAAFKEFTELKGRFPQVDEVS 344
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BLAST of mRNA_Ecto-sp13_S_contig7241.18374.1 vs. uniprot
Match: D7G896_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G896_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 1.610e-10
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   23 LRKYDEHKAQLCLADEELRPALRAGFMEFTELKRRLPQVDEA 64
            + KYDE KAQLCL +EE R +L+A F EFTELKRR PQVDEA
Sbjct:  301 ISKYDEQKAQLCLLEEEQRSSLKAAFAEFTELKRRFPQVDEA 342
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7241.18374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA28_9PHAE4.660e-1174.42PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7G896_ECTSI1.610e-1071.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7241contigEcto-sp13_S_contig7241:2399..3793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7241.18374.1mRNA_Ecto-sp13_S_contig7241.18374.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7241 978..4193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7241.18374.1 ID=prot_Ecto-sp13_S_contig7241.18374.1|Name=mRNA_Ecto-sp13_S_contig7241.18374.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MVESRLGNAGGTGGDGRAETAHLRKYDEHKAQLCLADEELRPALRAGFME
FTELKRRLPQVDEASVGCQCVQQNNCHRRRKYTR*
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