prot_Ecto-sp13_S_contig72382.18370.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig72382.18370.1
Unique Nameprot_Ecto-sp13_S_contig72382.18370.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig72382.18370.1 vs. uniprot
Match: A0A6H5JR07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR07_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 2.520e-48
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:   30 GEEKEHEDCGEGXXXXXXXXXXXXXXXXXXXATSVENLADLVPGGKEEEASMEQRLGEAVLARASDSFQHFQPRQLSRLCWALGAWHGRGLVKLPGSDVFAARSLSEAGQHPKEYTAE 147
            GEE E EDCGEG     XXXXXXXXXXXXX ATSVE LADLVPGGK+EEASMEQRLGEAVLARA+DSFQHFQPRQLSRLCWALGAW+GRG VKLPGSDVF ARSLSEAGQHPKEYTAE
Sbjct:  614 GEEVEQEDCGEGLSEEGXXXXXXXXXXXXXNATSVETLADLVPGGKKEEASMEQRLGEAVLARATDSFQHFQPRQLSRLCWALGAWNGRGSVKLPGSDVFVARSLSEAGQHPKEYTAE 731
[Close]
BLAST of mRNA_Ecto-sp13_S_contig72382.18370.1 vs. uniprot
Match: D7FYY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY5_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 7.490e-42
Identity = 89/140 (63.57%), Postives = 94/140 (67.14%), Query Frame = 0 
Query:   11 WGLGWVKSRLERGSGPEGDGEEKEHEDCGEGXXXXXXXXXXXXXXXXXXXATSVENLADLVP---GGKEEEASMEQRLGEAVLARASDSFQHFQPRQLSRLCWALGAWHGRGLVKLPGSDVFAARSLSEAGQHPKEYTAE 147
            WGLGWVKSR ERGSGPEGDGEE E EDCGEG                   ATSVE LADLV    GG+  + +              +SFQHFQPRQLSRLCWALGAWHGRG VKL GSD+FAARSLSEAGQHPKEYTAE
Sbjct:  710 WGLGWVKSRWERGSGPEGDGEE-EQEDCGEGLSEEGSGSGEASSDPADIHATSVETLADLVSRREGGRGFDGA--------------ESFQHFQPRQLSRLCWALGAWHGRGSVKLLGSDIFAARSLSEAGQHPKEYTAE 834
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72382.18370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JR07_9PHAE2.520e-4888.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYY5_ECTSI7.490e-4263.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig72382contigEcto-sp13_S_contig72382:31..678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig72382.18370.1mRNA_Ecto-sp13_S_contig72382.18370.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig72382 31..680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig72382.18370.1 ID=prot_Ecto-sp13_S_contig72382.18370.1|Name=mRNA_Ecto-sp13_S_contig72382.18370.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
GDADGGGGGAWGLGWVKSRLERGSGPEGDGEEKEHEDCGEGLSEEGSDSG
EASSDSADDNATSVENLADLVPGGKEEEASMEQRLGEAVLARASDSFQHF
QPRQLSRLCWALGAWHGRGLVKLPGSDVFAARSLSEAGQHPKEYTAE
back to top