prot_Ecto-sp13_S_contig7234.18364.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7234.18364.1
Unique Nameprot_Ecto-sp13_S_contig7234.18364.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length95
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7234.18364.1 vs. uniprot
Match: D8LIF7_ECTSI (Transmembrane protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF7_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.820e-45
Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0 
Query:    1 MGTIPGLTASMPPDPSQKIPPEARGRVRRXXXXXXXXXXXARGSTAGFPSATPARLAHGGAGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQAA 94
            MGTIPGLTASMPPDPSQKIPPEARGRVRRXXXXXXXXXXXARGSTAGFPSATPA LA GG GAGEDGGDANRTFVTSRGFPEVDHLGVVDGQAA
Sbjct:  125 MGTIPGLTASMPPDPSQKIPPEARGRVRRXXXXXXXXXXXARGSTAGFPSATPAELAQGGTGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQAA 218
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BLAST of mRNA_Ecto-sp13_S_contig7234.18364.1 vs. uniprot
Match: A0A6H5JCX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX9_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 8.690e-45
Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0 
Query:    1 MGTIPGLTASMPPDPSQKIPPEARGRVRRXXXXXXXXXXXARGSTAGFPSATPARLAHGGAGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQAA 94
            MGTIPGLT SMPPDPSQKIPPEARGRVRR XXXXXXXXXXARGSTAGFPSATPA LA GGAGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQAA
Sbjct:  140 MGTIPGLTVSMPPDPSQKIPPEARGRVRRKXXXXXXXXXXARGSTAGFPSATPAGLAQGGAGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQAA 233
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7234.18364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIF7_ECTSI2.820e-4596.81Transmembrane protein, putative n=1 Tax=Ectocarpus... [more]
A0A6H5JCX9_9PHAE8.690e-4595.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7234contigEcto-sp13_S_contig7234:5286..5570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7234.18364.1mRNA_Ecto-sp13_S_contig7234.18364.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7234 3982..7206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7234.18364.1 ID=prot_Ecto-sp13_S_contig7234.18364.1|Name=mRNA_Ecto-sp13_S_contig7234.18364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp
MGTIPGLTASMPPDPSQKIPPEARGRVRRKKKASASGGGGARGSTAGFPS
ATPARLAHGGAGAGEDGGDANRTFVTSRGFPEVDHLGVVDGQAA*
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