prot_Ecto-sp13_S_contig7234.18363.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7234.18363.1
Unique Nameprot_Ecto-sp13_S_contig7234.18363.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length372
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7234.18363.1 vs. uniprot
Match: D8LIF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF6_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.990e-43
Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 0 
Query:    1 MATATRKQRRKHAHWFNSECGSQEDFELQNGAGQRQARLDEAGEDEVELEDLAREAADVLLHVLVGAEVDHGMSESQEPEGRNGRTRWTATRFQD 95
            MA ATRKQRR+ AH FNSECGSQEDFE++NGAGQRQARLDE GEDEVELEDLARE ADVLLHVLVG EV HGM E++EPEGRNGRTRWTATRFQD
Sbjct:  183 MAAATRKQRRQQAHSFNSECGSQEDFEVENGAGQRQARLDEEGEDEVELEDLAREVADVLLHVLVGTEVGHGMGENKEPEGRNGRTRWTATRFQD 277
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7234.18363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIF6_ECTSI1.990e-4386.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7234contigEcto-sp13_S_contig7234:1084..3457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7234.18363.1mRNA_Ecto-sp13_S_contig7234.18363.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7234 5..3922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7234.18363.1 ID=prot_Ecto-sp13_S_contig7234.18363.1|Name=mRNA_Ecto-sp13_S_contig7234.18363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=372bp
MATATRKQRRKHAHWFNSECGSQEDFELQNGAGQRQARLDEAGEDEVELE
DLAREAADVLLHVLVGAEVDHGMSESQEPEGRNGRTRWTATRFQDAGEHA
WTSTRRRGSARRNSQSKGPLRTSNLTASSPRCGIEDAEEELQSRHHRRRP
VGQGTPDHGGTYRAKDGSASIGGNYERASATNGATSISAENRGGTGGTSA
KSSCELSPGAVHYDQRSGVGARRRARSERGVAGAEAVAMPNHDAVRRMEG
IRRGGGEDGGATLLHGVKSTRRGHLQGGRPPTSIADSWMNTLLDGSRLSA
SAEKDASAEKDTLLSTALAGKSRPRAWVRGCRDDSRQRTTSLGCQSPSTR
KICQRIHDAQTALRTLRRTTD*
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