prot_Ecto-sp13_S_contig7224.18351.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7224.18351.1
Unique Nameprot_Ecto-sp13_S_contig7224.18351.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1125
Homology
BLAST of mRNA_Ecto-sp13_S_contig7224.18351.1 vs. uniprot
Match: D7FUQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ6_ECTSI)

HSP 1 Score: 799 bits (2063), Expect = 9.110e-262
Identity = 863/1134 (76.10%), Postives = 878/1134 (77.43%), Query Frame = 0
Query:    1 MRHDAPGFGSWQRATDDENDHHPPSRATDDSLEGGDESEADDFGVAAAVLVQDLAAKERAMGEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSA--HPAKSSAGGDLLGTNGGVARRGRRGGRGGATDTPRREVAAVRLQATVAATVAEVAAETYDGGSLQSGFFNSLDXXXXXXXXGESSHIGGLPMSGPRSPREAAVIPMPGRREPDTESESYRHRNPPTPPAGSTSSEGFFAGGLPLAGSRSPPPPAAGRGAPGRRDXXXXXXXXXGVPSSLLPLSAGNRSSSPGXXXXXXXXXXXXXXXXXGPVPAPAAVIGTTAGTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDRGREPLRNRQQLRQVPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWRTVSGXRXXXXXXXXXXXXXXXXXXXXXXXXXX--APVVPGLRATHFAPGFVGVAWPDPFGEPAAVRQLNAARERVLTKIEEASARKIAEXXXXXXXXXXXXXXXXXXRNTMLEEKVRREIKNAMDEQERRLRRQLEAAQRRQVAAAATSPPATGRTGMTGPATIGAAA----------RERAEAVRRRRAMLEADEARVKIYAFKRRGELRTQALLRGCARGGAASEEDIAAAAEAFEAAAAAGTGAGVQVAKGAVIAGGAPRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAVGARRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSAWAQXXXXDRAVARRLEHLDRVAARLEEAGAEIEANIDLLGLEHGRAPRRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KRVDSPVALQRPARGRPKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK---NLRGDYEVRAGDSCLGGTTIIATVAVTATVTSKTGRERRWWPCGPVGDGRPNERKKXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVRPVCSGRTREAGSGTARSTGRRWSRSRATRCGCGRSR 1115
            MRH APGFGSW+RATDDENDH PPS+ATDDSLEGGDESEADDFGVAAAVLVQDLAAKERAMGEDE         XXXXXXXXXXXXXXXXXX      +P  SSAGGDL                GGA DTPRRE AAVRLQATVAATVAEVAAETYDGGSL+SGFFNSLDXXXXXX   +SSHIGGLPMSG RSPREAAVIP  GRREPDT++ES+RH NPPTPPAGSTSSEGFFAGGLPLAGSRSPPP AAGRGAPGRRDXXXXXXXXX    SLLPLSAGNRSS P                  GPVPAPA VIGTTAGTNG                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GV RGREPLRNR        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       X XXXXXXXXXXXXXXXXXXXXXXXXXX  APVVPGLRATHFAPGFVGVAWPDPF EPAAVRQLNAARERVLTKIEEASARKIAE     XXXXXXXXXX   RNTMLE+KVR EIK+AM+EQERRLRRQLE                                          RERAEAVRRRRAMLEADEAR KIYAFKRRGELRTQALLRGCARGGAASEEDIAAAAEAFEAAA  G G GV+VAKGAVIAGG PRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAV ARR R          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           DRAVARRLEHLDRVAARLEEAGAEIEANIDLLGLEHGRAPRRSAXXXXXXXXXXXXXXXXXXXX    XXXXXXXXX        XXXXXXXXXXXX   RV SPVALQRPARGRPKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    NL GD+EV AGDS LGG TIIATVAVTATVT KTGRERRWWP GPVGDG P ERKK                           T V PVCSGR+  A SGTAR+TGRRWSRSRATRCGC RSR
Sbjct:  269 MRHAAPGFGSWERATDDENDHRPPSQATDDSLEGGDESEADDFGVAAAVLVQDLAAKERAMGEDESGNDGSSLRXXXXXXXXXXXXXXXXXXXXXXXXYPVNSSAGGDLG---------------GGAMDTPRREAAAVRLQATVAATVAEVAAETYDGGSLRSGFFNSLDXXXXXX---QSSHIGGLPMSGSRSPREAAVIPRSGRREPDTDTESHRHGNPPTPPAGSTSSEGFFAGGLPLAGSRSPPPLAAGRGAPGRRDXXXXXXXXXXXXXSLLPLSAGNRSS-PRPGGGRLRRRQRRQPEEQGPVPAPAGVIGTTAGTNGDGSSSGPLEALSSSPRAPRPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GVGRGREPLRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPVVPGLRATHFAPGFVGVAWPDPFEEPAAVRQLNAARERVLTKIEEASARKIAEVEERAXXXXXXXXXXQKRRNTMLEKKVRGEIKDAMEEQERRLRRQLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERAEAVRRRRAMLEADEARAKIYAFKRRGELRTQALLRGCARGGAASEEDIAAAAEAFEAAAGVGAGXGVKVAKGAVIAGGTPRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAVYARRDRARESNARAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------DRAVARRLEHLDRVAARLEEAGAEIEANIDLLGLEHGRAPRRSAXXXXXXXXXXXXXXXXXXXXRWGSXXXXXXXXXSISRFVNGXXXXXXXXXXXXXGNRVGSPVALQRPARGRPKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLGGDHEVWAGDSRLGGATIIATVAVTATVTLKTGRERRWWPRGPVGDGGPKERKKQREPEQEGGAASGLNLAVLPPPMAAMTTAVGPVCSGRSLGAESGTARTTGRRWSRSRATRCGCARSR 1370          
BLAST of mRNA_Ecto-sp13_S_contig7224.18351.1 vs. uniprot
Match: A0A6H5JRR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR9_9PHAE)

HSP 1 Score: 726 bits (1874), Expect = 7.560e-233
Identity = 800/1188 (67.34%), Postives = 821/1188 (69.11%), Query Frame = 0
Query:    1 MRHDAPGFGSWQRATDDENDHHPPSRATDDSLEGGDESEADDFGVAAAVLVQDLAAKERAMGED-EXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSAHPAKSSAGGDLLGTNGGVARRGRRGGRGGATDTPRREVAAVRLQATVAATVAEVAAETYDGGSLQSGFFNSLDXXXXXXXXGE-SSHIGGLPMSGPRSPREAAVIPMPGRREPDTESESYRHRNPPTPPAGSTSSEGFFAGGLPLAGSRSPPPPAAGRGAPGRRDXXXXXXXXXGVPSSLLPLSAGNRSSSPGXXXXXXXXXXXXXXXXXGPVPAPAAVIGTTAGTNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDRGREPLRNRQQLRQVPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWRTVSGXRXXXXXXXXXXXXXXXXXXXXXXXXXXAPVVPGLRATHFAPGFVGVAWPDPFGEPAAVRQLNAARERVLTKIEEASARKIAEXXXXXXXXXXXXXXXXXXRNTMLEEKVRREIKNAMDEQERRLRRQLEAAQRRQVAAAATSPPATGRTGM--------TGPATIGAAARERAEAVRRRRAMLEADEARVKIYAFKRRGELRTQALLRGCARGGAASEEDIAAAAEAFEAAAA--AGTGAGVQVAKGAVIAGGAPRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAVGARRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------EQSAWAQXXXX-----------------------------------------------DRAVARRLEHLDRVAARLEEAGAEIEANIDLLGLEHGRAPRRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KRVDSPVALQRPARGRPKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----------------------------------------------------NLRGDYEVRAGDSCLGGTTIIATVAVTATVTSKTGRERRWWPCGPVGDGRPNERKK 1048
            MR  APGFGSW+R TDD+NDH PPS+ATDDSLEGGDESEADDFGVAAAVL+QDLAAKERAM ED          XXXXXXXXXXXXXXXXXXX  SAHP  SS GGDLLGT+GG A R RR     A DTPRRE A+V+LQATVAATVAEVAAET+DGGSLQSGFFNSLDXXXXXXXX   SSHIGGLPMSG RSPREAAVIPMPGRREPDTESES+RHRNPPTPPAGSTSSE FFAGGLPLAGSRSPPP AAGRGAPGRRD         G PSSLL LSAG+R     XXXXXXXXXXXXXXXXX      AAV+GTTAGTN                                                                    XXXXXXXXXXAGV RGREPLRN+QQLRQVPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       X XXXXXXXXXXXXXXXXXXXXXXXXXXAPVVPGLRATHFAPGFVGVAWPDPF EP+AVRQLNAARERVLTKIEEASARKIAE     XXXXXXXXXX   RNTMLE+KVR EIK+A++EQERRLRRQLE                              T   TIGAAARERAEAVRRRRA+LEADEAR KIYAFKRRGELRTQALLRGCARGGAASEEDIAAAAEAFE       G GAGV+ AKG VIAGG  RPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAVGARR R         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           E S+ A                                                    DRAVARRLEHLDRVAARLEEAGAEIEANIDLLGLEHGRAPRRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRV SPVALQRPARGRPKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    X                                                      L GD+EVRAG S LGGTTI ATVAVTATVT KTGRERRWWP GPVGDG P ERKK
Sbjct:  288 MRDAAPGFGSWKRVTDDQNDHRPPSQATDDSLEGGDESEADDFGVAAAVLLQDLAAKERAMDEDGSGIDGSSLRXXXXXXXXXXXXXXXXXXXXXSAHPVNSSTGGDLLGTSGGAAGRSRRXXXXXAMDTPRREAASVKLQATVAATVAEVAAETFDGGSLQSGFFNSLDXXXXXXXXXXXSSHIGGLPMSGSRSPREAAVIPMPGRREPDTESESHRHRNPPTPPAGSTSSEVFFAGGLPLAGSRSPPPAAAGRGAPGRRDPSSSDADSSGGPSSLLSLSAGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVGTTAGTN----CGGSSSGPLEALSSPPRAPRPATGGGIGGMRQRDGATEDMLWRNRSSEVSCWEHEKSTGDEEGSXXXXXXXXXXAGVGRGREPLRNKQQLRQVPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVVPGLRATHFAPGFVGVAWPDPFEEPSAVRQLNAARERVLTKIEEASARKIAEVEERAXXXXXXXXXXQKRRNTMLEKKVRGEIKDALEEQERRLRRQLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTXXXTIGAAARERAEAVRRRRALLEADEARAKIYAFKRRGELRTQALLRGCARGGAASEEDIAAAAEAFEXXXXXXTGAGAGVKAAKGVVIAGGTTRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRRENAVGARRDRARESNARAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPGYPPLVEILGEAREVVDNNDEDSSDAASSEGAERGVRVEVRVPSVNGTEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAVARRLEHLDRVAARLEEAGAEIEANIDLLGLEHGRAPRRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVVSPVALQRPARGRPKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAPNRSRGSTSLSRSPARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLGGDHEVRAGGSRLGGTTISATVAVTATVTLKTGRERRWWPLGPVGDGGPKERKK 1471          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7224.18351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUQ6_ECTSI9.110e-26276.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRR9_9PHAE7.560e-23367.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 522..598
NoneNo IPR availableCOILSCoilCoilcoord: 825..845
NoneNo IPR availableCOILSCoilCoilcoord: 778..806

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7224contigEcto-sp13_S_contig7224:273..7105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7224.18351.1mRNA_Ecto-sp13_S_contig7224.18351.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7224 237..7650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7224.18351.1 ID=prot_Ecto-sp13_S_contig7224.18351.1|Name=mRNA_Ecto-sp13_S_contig7224.18351.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1125bp
MRHDAPGFGSWQRATDDENDHHPPSRATDDSLEGGDESEADDFGVAAAVL
VQDLAAKERAMGEDESGNDGSSSRRSSSRVSSSSSSSSSNSDLSSAHPAK
SSAGGDLLGTNGGVARRGRRGGRGGATDTPRREVAAVRLQATVAATVAEV
AAETYDGGSLQSGFFNSLDDDDDDDDDGESSHIGGLPMSGPRSPREAAVI
PMPGRREPDTESESYRHRNPPTPPAGSTSSEGFFAGGLPLAGSRSPPPPA
AGRGAPGRRDPSSSDADSSGVPSSLLPLSAGNRSSSPGPGRGRLRRRQRR
QPKEQGPVPAPAAVIGTTAGTNGGGSSSGSSSGPPEALSSPPRAPRPATG
GGEAGRRQRDGAAEDTLSRNRSSEVSWWEHENSTGEEEGSGGGGRREGAA
AGVDRGREPLRNRQQLRQVPRRRQPKAAAAAVVPARNNASSSSRRGGAKN
VKQRPPVWRTVSGGRWAGGTQTVVAAAAAAAPPAKAEEEEEAPVVPGLRA
THFAPGFVGVAWPDPFGEPAAVRQLNAARERVLTKIEEASARKIAEVEER
ARRARRERAEKQKRRNTMLEEKVRREIKNAMDEQERRLRRQLEAAQRRQV
AAAATSPPATGRTGMTGPATIGAAARERAEAVRRRRAMLEADEARVKIYA
FKRRGELRTQALLRGCARGGAASEEDIAAAAEAFEAAAAAGTGAGVQVAK
GAVIAGGAPRPRFESWNELRRSKAEEIRLQGTMEKAFKALHGVAARRREN
AVGARRARARESNARAEEGHGRARKRLRMQAETAAARAEARAKEAAEAAA
AEAEAREQSAWAQEEEEDRAVARRLEHLDRVAARLEEAGAEIEANIDLLG
LEHGRAPRRSAAASYGGGNGDPPDIIYHDVRRRSTGREEEEHSISRFVNG
GRRRRARKRRDGGGKRVDSPVALQRPARGRPKARGGGGGGVVSGRLAAPT
ARRGGVLRNRRRGAREEAATATALNHALTTFLTRRRRRRRRKNLRGDYEV
RAGDSCLGGTTIIATVAVTATVTSKTGRERRWWPCGPVGDGRPNERKKRR
EPEQEEGAASGLNLVVLPPSKVTTTTVVRPVCSGRTREAGSGTARSTGRR
WSRSRATRCGCGRSRTTSPRCCGG*
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