prot_Ecto-sp13_S_contig7214.18337.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7214.18337.1
Unique Nameprot_Ecto-sp13_S_contig7214.18337.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length521
Homology
BLAST of mRNA_Ecto-sp13_S_contig7214.18337.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 7.850e-161
Identity = 292/334 (87.43%), Postives = 300/334 (89.82%), Query Frame = 0
Query:    1 RFFAPHKSGGGGDSCYSARSNRDLGDVDGREGAPAGALPVSPPRSPPPAAAAASPDVDVGGDGVTGAGTPGRSSQLEGGSDGRKTRATTAAAADERVAGSGFLYQVVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLAKEREGEVLPGELRRRTSLDLKQFTDRPLALPGRKRDSGSLGSVTPYSKAERQSEDSVYSLTAGAGGDGGATRVGGGMQASPSIREGEGGPAMHKLFSIELRRTQIQLLGSETARATLLFSMEQGVIQGWVGLDPVEEGVVAARLKQGDVVESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPT 334
            RFF      GG DSC+SARS+RDLGD D REGAPAGALP SPPRSPPPAAAA SPD D+GGDGV+ AGTPG SS+ EGG DGR TR   AAAADERVAGSGFLY+VVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLAKEREGEVLPGELRRRTSLDLKQFTD+PLALPGRKRDSGSLGS TP+SKAERQSEDS YSLTAGA      TRVG G  ASPSIR GEGGPAMHKLFSIELRRTQIQLLGSETARATLLFSMEQGVIQGWVGLDPVEEGVVAARLKQGDV ES RLQCLAQRLLTTFREAVTVGLEGTMLSAAPT
Sbjct: 2999 RFFPR----GGRDSCHSARSSRDLGDNDRREGAPAGALPTSPPRSPPPAAAA-SPDTDLGGDGVSRAGTPGGSSRPEGGRDGRTTR-VAAAAADERVAGSGFLYRVVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLAKEREGEVLPGELRRRTSLDLKQFTDKPLALPGRKRDSGSLGSATPFSKAERQSEDSAYSLTAGAXXXXXXTRVGAGAPASPSIRGGEGGPAMHKLFSIELRRTQIQLLGSETARATLLFSMEQGVIQGWVGLDPVEEGVVAARLKQGDVAESYRLQCLAQRLLTTFREAVTVGLEGTMLSAAPT 3326          
BLAST of mRNA_Ecto-sp13_S_contig7214.18337.1 vs. uniprot
Match: A0A6H5KUC4_9PHAE (Apt1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC4_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 4.670e-57
Identity = 168/250 (67.20%), Postives = 172/250 (68.80%), Query Frame = 0
Query:  271 MEQGVIQGWVGLDPVEEGVVAARLKQGDVVESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPTDVDVDAGVQWLPDSALSPPRLPASSSSHAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRVGVARGATDGGDVGVGRDVRHGVRGESSVGSRSAAKPEGQHEGVGSGDDGSVAATAAAARLPPSAVSTQPTPALAPSGEEENAPRQTHLRRSAAT 520
            MEQGVIQGWVGLDPVEEGV+AA  KQGDVVESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPTDVDVDAGVQWLPDSAL+PP LPASSSSHAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                     GQ +GVGSGDDGSVAA  AAARLPPSAVSTQP PALAPSGEE+ APRQTHLRRSA T
Sbjct:    1 MEQGVIQGWVGLDPVEEGVIAASPKQGDVVESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPTDVDVDAGVQWLPDSALAPPHLPASSSSHAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------GQDKGVGSGDDGSVAAAVAAARLPPSAVSTQPAPALAPSGEEK-APRQTHLRRSATT 180          
BLAST of mRNA_Ecto-sp13_S_contig7214.18337.1 vs. uniprot
Match: A0A6H5KJB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB8_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 6.060e-48
Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    1 RFFAPHKSGGGGDSCYSARSNRDLGDVDGREGAPAGALPVSPPRSPPPAAAAASPDVDVGGDGVTGAGTPGRSSQLEGGSDGRKTRATTAAAADERVAGSGFLYQVVFDGLNVLITLKLR 120
            RFF PHKSGGG DSCYSARS+RDLGDVDGREGAPAGALP+S P SP PAAAAA PD DVGGDGVTGAGTPG SS+ EGGSDGRKTRAT AA ADERVAGSGFLY+VVFDGLN+LITLKLR
Sbjct:  557 RFFPPHKSGGG-DSCYSARSSRDLGDVDGREGAPAGALPISSPPSPLPAAAAALPDADVGGDGVTGAGTPGGSSRPEGGSDGRKTRATAAATADERVAGSGFLYRVVFDGLNLLITLKLR 675          
BLAST of mRNA_Ecto-sp13_S_contig7214.18337.1 vs. uniprot
Match: A0A835Z2Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Z4_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.010e-30
Identity = 112/318 (35.22%), Postives = 154/318 (48.43%), Query Frame = 0
Query:   92 AADERVAGSGFLYQVVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLAKE------------REGEV-LPGELRRRTSLDLK------------QFTDRPLALPGRKRDSGSL-----GSVTPYSKAERQSEDS-------VYSLTAGAGGDGGA----------------TRVGGGM-----QASPSIREGEGGPAMHKLFSIELRRTQIQLLGSETARATLLFSMEQGVIQGWVGLDPVEEGVVAARLKQGDVVESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPTDVDVDAGVQWLPDSALS 351
            A+  RV GS FLY+VV D + +L+T + RD ++LL  S  + A+A +P L  P  ALL                 G V +P  L                         +  AL G++  S  +      + T   +A++  E S        Y   + +GG G A                 R GGG       A+    +G  GP  HKLFSIEL + Q+QLL  + ++++++FS+E G +QGWVGLDP      A      D     RLQCLAQRLLTTF E +T+ ++G M+SAAPTDVDV AGV WLP+SAL+
Sbjct: 1223 ASQARVDGSTFLYRVVIDRVCILVTPEQRDRLILLGMSAYDRAVAAIPELQHPPAALLVPSPWETAAGAGTGGAGGTVGVPDALSASAXXXXXXXXXXXXXXXXASLAQQEAALWGKRNSSLDMYEALSSAATVAWRADQAPESSPLPSAYAAYGAESESGGGGSAPLSPRQGGVSSAFLLPARGGGGQGEGDEAAAAGSDDGVNGPN-HKLFSIELHQLQMQLLDEDVSKSSVIFSLEHGAVQGWVGLDPGAPPCAA------DAQRRRRLQCLAQRLLTTFEETITIAVQGVMISAAPTDVDVGAGVTWLPESALT 1533          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7214.18337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7K0_ECTSI7.850e-16187.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUC4_9PHAE4.670e-5767.20Apt1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KJB8_9PHAE6.060e-4886.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2Z4_9STRA2.010e-3035.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7214contigEcto-sp13_S_contig7214:1335..6382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7214.18337.1mRNA_Ecto-sp13_S_contig7214.18337.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7214 1333..6382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7214.18337.1 ID=prot_Ecto-sp13_S_contig7214.18337.1|Name=mRNA_Ecto-sp13_S_contig7214.18337.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=521bp
RFFAPHKSGGGGDSCYSARSNRDLGDVDGREGAPAGALPVSPPRSPPPAA
AAASPDVDVGGDGVTGAGTPGRSSQLEGGSDGRKTRATTAAAADERVAGS
GFLYQVVFDGLNVLITLKLRDSILLLVQSGLEVALANLPGLFKPSKALLA
KEREGEVLPGELRRRTSLDLKQFTDRPLALPGRKRDSGSLGSVTPYSKAE
RQSEDSVYSLTAGAGGDGGATRVGGGMQASPSIREGEGGPAMHKLFSIEL
RRTQIQLLGSETARATLLFSMEQGVIQGWVGLDPVEEGVVAARLKQGDVV
ESCRLQCLAQRLLTTFREAVTVGLEGTMLSAAPTDVDVDAGVQWLPDSAL
SPPRLPASSSSHAQTSRRRRSRQMPTRPPLPHSGGGTSSAPTAAAAGVAA
TSWGGLEKQQQQQQRQQQQQAERRRVGVARGATDGGDVGVGRDVRHGVRG
ESSVGSRSAAKPEGQHEGVGSGDDGSVAATAAAARLPPSAVSTQPTPALA
PSGEEENAPRQTHLRRSAATE
back to top