prot_Ecto-sp13_S_contig7213.18336.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7213.18336.1
Unique Nameprot_Ecto-sp13_S_contig7213.18336.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7213.18336.1 vs. uniprot
Match: D7G6Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q5_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 1.440e-45
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0 
Query:    1 MDVLRELERMHAAAWEREQAERTLLARLEDQADGLRNADEAREAHEGAARAAVAEAERLLVKIEGLAKENRGNAEQLAQEQAAATELRRRVDAAEPLVEELRA 103
            MDVLRELERMHAAAWEREQAERTLLARLEDQADGLR ADEARE HEGAARAAVAEA+RL+VKIEGL KENR NAEQLAQEQAAATELRRRVDAAEPLVEELRA
Sbjct: 1463 MDVLRELERMHAAAWEREQAERTLLARLEDQADGLRIADEARETHEGAARAAVAEADRLMVKIEGLEKENRANAEQLAQEQAAATELRRRVDAAEPLVEELRA 1565
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BLAST of mRNA_Ecto-sp13_S_contig7213.18336.1 vs. uniprot
Match: A0A6H5JDN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN1_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 6.920e-26
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0 
Query:    1 MDVLRELERMHAAAWEREQAERTLLARLEDQADGLRNADEAREAHEGAARAAVAEAERLLVK 62
            MDVLRELERMHAAAWEREQAERTLLARLEDQADGLRNADEAREAHEGAARAAVAEAERL+VK
Sbjct: 1103 MDVLRELERMHAAAWEREQAERTLLARLEDQADGLRNADEAREAHEGAARAAVAEAERLVVK 1164
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7213.18336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6Q5_ECTSI1.440e-4594.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDN1_9PHAE6.920e-2698.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availableCOILSCoilCoilcoord: 49..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7213contigEcto-sp13_S_contig7213:2974..4431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7213.18336.1mRNA_Ecto-sp13_S_contig7213.18336.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7213 2974..4445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7213.18336.1 ID=prot_Ecto-sp13_S_contig7213.18336.1|Name=mRNA_Ecto-sp13_S_contig7213.18336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MDVLRELERMHAAAWEREQAERTLLARLEDQADGLRNADEAREAHEGAAR
AAVAEAERLLVKIEGLAKENRGNAEQLAQEQAAATELRRRVDAAEPLVEE
LRA
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