prot_Ecto-sp13_S_contig7194.18310.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7194.18310.1
Unique Nameprot_Ecto-sp13_S_contig7194.18310.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length527
Homology
BLAST of mRNA_Ecto-sp13_S_contig7194.18310.1 vs. uniprot
Match: A0A6H5L6E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E1_9PHAE)

HSP 1 Score: 578 bits (1489), Expect = 3.010e-188
Identity = 413/492 (83.94%), Postives = 424/492 (86.18%), Query Frame = 0
Query:   37 VGNDDTMASLRRLIGLWLFFHEMARSSSLASQSALGLVRLLQAAGEGDARLYTLRVSTDSMRSGSSRGAGVRGRSLPPSLRKMEGELLPVCLLSSIVRTAERDEEADGPPEGVANSNNRSCEDGGAMFPLDVDDDDXXNADEDAYMADEFDPAGPPKGDTXXXXXXXXXXXXXXXXXXXXXXXXXX--ITDEGSMTLSSCSGXXXXXXXXXVPSPYYASDVSQRFAASVDRRTATAAPSLSXXXXXXXXXXXXXXXXXXXXXXXXTAPMGMSVDSSRWAGAKSTTVATXXXXXXXXXXSAAGLPCFSGGSVNLTRCSSSNSLPATXXXXXXXXPAWRGRSASGDGITCRVSSAPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSSYPSLSTIHDHRRSQRLSAPERHAQAAVTSAAAAVPSGGRWEQVTRSWGENGVGRGLVDFLRSTTGTRSEALLCGWAGMLPPAEQATLTALLDKTA 526
            VGNDDTMASLRRLIGLWLFFHEMARSSSLASQSALGLVRLLQAAG+GDARLYTLRVSTDSM SGSSRGAGVRGRSLPPSLRKMEGELLPVCLLSSIVRTAERDEEADGPPEGVAN+NNRSCEDGGAMFPLDV+DDD  NADEDAYMADEFDPAGPP+GDTXXXXXXXXXXXXXXXXXXXXXXXXXX  ITDEGS+TLSSCSG         VPSPYYAS VSQRFAA+V+RR ATAAP LS    XXXXXXXXXXXXXXXXX        MSVDSS WAG        XXXXXXX   SAAGLPCFSGGSVNLTRCSSSNSLPA     XX  PAWRGRSASGDGITCRVSSAPLAAXXXXXXXXXXXXXXXXX         XXXXXXXX   GSSYPSLSTIHDHRRSQR SA ER AQAAVT+AA+ V +GG WE V RSWGENGVGRGLVDFLRSTTGTRSEALLCGWAGMLPPAEQATLTALLDKT+
Sbjct: 1082 VGNDDTMASLRRLIGLWLFFHEMARSSSLASQSALGLVRLLQAAGDGDARLYTLRVSTDSMGSGSSRGAGVRGRSLPPSLRKMEGELLPVCLLSSIVRTAERDEEADGPPEGVANNNNRSCEDGGAMFPLDVEDDDD-NADEDAYMADEFDPAGPPEGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXITDEGSITLSSCSGGGDGGG---VPSPYYASGVSQRFAAAVNRRPATAAPPLSSSAPXXXXXXXXXXXXXXXXX--------MSVDSSHWAGXXXXXXXXXXXXXXXTAFSAAGLPCFSGGSVNLTRCSSSNSLPAVTAAAXXAAPAWRGRSASGDGITCRVSSAPLAAXXXXXXXXXXXXXXXXXCPRDASWLVXXXXXXXXGGTGSSYPSLSTIHDHRRSQRPSAAERQAQAAVTAAASGVLNGGMWEHVARSWGENGVGRGLVDFLRSTTGTRSEALLCGWAGMLPPAEQATLTALLDKTS 1561          
BLAST of mRNA_Ecto-sp13_S_contig7194.18310.1 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 542 bits (1396), Expect = 5.710e-174
Identity = 397/498 (79.72%), Postives = 404/498 (81.12%), Query Frame = 0
Query:   37 VGNDDTMASLRRLIGLWLFFHEMARSSSLASQSALGLVRLLQAAGEGDARLYTLRVSTDSMRSGSSRGAGVRGRSLPPSLRKMEGELLPVCLLSSIVRTAERDEEADGPPEGVANSNN-------RSCEDGGAMFPLDVDDDDXXNADEDAYMADEFDPAGPPKGDTXXXXXXXXXXXXXXXXXXXXXXXXXXITDEGSMTLSSCSGXXXXXXXXX-VPSPYYASDVSQRFAASVDRRTATAAPSLSXXXXXXXXXXXXXXXXXXXXXXXXTAPMGMSVDSSRWAGAKSTTVATXXXXXXXXXXSAAGLPCFSGGSVNLTRCSSSNSLPATXXXXXXXXPAWRGRSASGDGITCRVSSAPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSSYPSLSTIHDHRRSQRLSAPERHAQAAVTSAAAAVPSGGRWEQVTRSWGENGVGRGLVDFLRSTTGTRSEALLCGWAGMLPPAEQATLTALLDKTA 526
            VGNDD MASLRRLIGLWLFFHEMARSSSLASQSALGLVRLL+AAGEGDARLYTLRVSTDSM SGSSRGAGVRGRSLPPSLRKMEGELLPVCLLSSIVRTAERDEEADGPPEGVAN          RSCEDGGAMFPLDVDDD+  NADEDA MADEFDPAGPP+GD XXXXXXXXXXXXXXXXXXXXXXXXX ITDEGSMTLSSCSGXXXXXXXXX VPSPYYASDVSQRF A+VDRRTATA P LS                        TAPMGMSVDSSRWAGA STT   XXXX      SAAGLPCFSGGSVNLTRCSSSNSLPA         PAWRGRSASGDGITCRVSSAPLA+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +PSLSTIHDHRRSQR                  VPSGG WE V RSWGENGVGRGLVDFLRSTTGTRSEALLCGWAGMLP AEQATLTALLDKT+
Sbjct: 1160 VGNDDAMASLRRLIGLWLFFHEMARSSSLASQSALGLVRLLKAAGEGDARLYTLRVSTDSMGSGSSRGAGVRGRSLPPSLRKMEGELLPVCLLSSIVRTAERDEEADGPPEGVANXXXXXXXXXXRSCEDGGAMFPLDVDDDED-NADEDACMADEFDPAGPPEGDXXXXXXXXXXXXXXXXXXXXXXXXXX-ITDEGSMTLSSCSGXXXXXXXXXXVPSPYYASDVSQRFTAAVDRRTATAVPPLSSSAPAATAQVAAA-----------TAPMGMSVDSSRWAGATSTTATXXXXXSSATTFSAAGLPCFSGGSVNLTRCSSSNSLPAAAAAA----PAWRGRSASGDGITCRVSSAPLASEGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HPSLSTIHDHRRSQRPXXXXXXXXXXXXXXXXXVPSGGTWEHVARSWGENGVGRGLVDFLRSTTGTRSEALLCGWAGMLPAAEQATLTALLDKTS 1639          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7194.18310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6E1_9PHAE3.010e-18883.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8B3_ECTSI5.710e-17479.72Importin N-terminal domain-containing protein n=1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7194contigEcto-sp13_S_contig7194:1076..3894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7194.18310.1mRNA_Ecto-sp13_S_contig7194.18310.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7194 244..4501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7194.18310.1 ID=prot_Ecto-sp13_S_contig7194.18310.1|Name=mRNA_Ecto-sp13_S_contig7194.18310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=527bp
MSNGGVGGERLGAASSPAGAVAAAGAVARGGGGSGGVGNDDTMASLRRLI
GLWLFFHEMARSSSLASQSALGLVRLLQAAGEGDARLYTLRVSTDSMRSG
SSRGAGVRGRSLPPSLRKMEGELLPVCLLSSIVRTAERDEEADGPPEGVA
NSNNRSCEDGGAMFPLDVDDDDDDNADEDAYMADEFDPAGPPKGDTDEDS
DDDDDDDSDDDDEDDEESDTEDITDEGSMTLSSCSGGGDGGGGGGVPSPY
YASDVSQRFAASVDRRTATAAPSLSSSAPAATAQVAAAAAAAAAAAAAAT
APMGMSVDSSRWAGAKSTTVATTAAASSAMALSAAGLPCFSGGSVNLTRC
SSSNSLPATAAAAAAAAPAWRGRSASGDGITCRVSSAPLAAGGGGEGAGG
GQQLLSSSCPRDSSWLLTAGGGNNHGGAGSSYPSLSTIHDHRRSQRLSAP
ERHAQAAVTSAAAAVPSGGRWEQVTRSWGENGVGRGLVDFLRSTTGTRSE
ALLCGWAGMLPPAEQATLTALLDKTA*
back to top