prot_Ecto-sp13_S_contig718.18295.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig718.18295.1
Unique Name	prot_Ecto-sp13_S_contig718.18295.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	472

Homology

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BLAST of mRNA_Ecto-sp13_S_contig718.18295.1 vs. uniprot
Match: A0A6H5KJM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM1_9PHAE)

HSP 1 Score: 617 bits (1591), Expect = 5.330e-218
Identity = 431/471 (91.51%), Postives = 438/471 (92.99%), Query Frame = 0

Query:    1 MDLPSSATMGDACFSPSSGGDGKRKRNRKAKKFADYVAWEEEAPTEREEEPTEDGQHHNKRNRKGKSTATQQTPQQSSPFGATPVASSSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRAVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXEEAARMGKEQESSPAVLQPRTGTVEGQEEAKAVNAREAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVSNTTVAPCSIPPAPXXXXGGPP 471
            MD+PSS T+GDACFSP++GGDGKRKRNRKAKKFADYVAWEEEA TEREE PT+DGQHHNKRNRKGKSTATQQTP QSSPF ATPVAS SPSDTAPAT SHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGR VSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX  AAR GKEQESS AVLQPRT  VEGQEEAKAV+AREAAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXX                SGATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVS+T VAPCSIPPAPXXXXGGPP
Sbjct:    1 MDVPSSTTVGDACFSPTTGGDGKRKRNRKAKKFADYVAWEEEATTEREE-PTDDGQHHNKRNRKGKSTATQQTPNQSSPFAATPVASPSPSDTAPATDSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRGKEQESSAAVLQPRTDMVEGQEEAKAVHAREAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHTTASLTSG-----SGATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVSSTNVAPCSIPPAPXXXXGGPP 465

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BLAST of mRNA_Ecto-sp13_S_contig718.18295.1 vs. uniprot
Match: D7FN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN54_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 1.290e-137
Identity = 218/233 (93.56%), Postives = 221/233 (94.85%), Query Frame = 0

Query:    1 MDLPSSATMGDACFSPSSGGDGKRKRNRKAKKFADYVAWEEEAPTEREEEPTEDGQHHNKRNRKGKSTATQQTPQQSSPFGATPVASSSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRAVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADP 233
            MD+PSS TMGDACFSPS+GGDGKRKRNRKAKKFADYVAWEEEA TEREEEPTEDGQHHNKRNRKGKSTATQQTP QSSPF ATPVAS SPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGR VSLGSISKRIKTSQAELTGLNERINVLK    +  P
Sbjct:    1 MDVPSSTTMGDACFSPSTGGDGKRKRNRKAKKFADYVAWEEEATTEREEEPTEDGQHHNKRNRKGKSTATQQTPHQSSPFAATPVASPSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKISPVREQP 233

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig718.18295.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig718.18295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KJM1_9PHAE	5.330e-218	91.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FN54_ECTSI	1.290e-137	93.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 207..227
None	No IPR available	PANTHER	PTHR45614:SF53		coord: 26..321
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 26..321

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig718	contig	Ecto-sp13_S_contig718:4898..8768 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig718.18295.1	mRNA_Ecto-sp13_S_contig718.18295.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig718 4729..8886 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig718.18295.1 ID=prot_Ecto-sp13_S_contig718.18295.1|Name=mRNA_Ecto-sp13_S_contig718.18295.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=472bp
MDLPSSATMGDACFSPSSGGDGKRKRNRKAKKFADYVAWEEEAPTEREEE
PTEDGQHHNKRNRKGKSTATQQTPQQSSPFGATPVASSSPSDTAPATGSH
DTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVME
ALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRAVSL
GSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDK
SLEEDPFYSVAYKATCTAATKAAKAAAAAARATAAAQARKKAAENAVAVA
ASAAAAEATRQAEEAARMGKEQESSPAVLQPRTGTVEGQEEAKAVNAREA
AAAAAAAAAATVAAATAAAATASAATAASAAAATAAVASHTTASLTSSSG
ATSGTGAVSALPTSTLSPAAPAPSPPPALATAIAEPPNPFVGELGGLVVS
NTTVAPCSIPPAPPAPPGGPP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015495	Myb-like_TF