prot_Ecto-sp13_S_contig714.18246.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig714.18246.1
Unique Nameprot_Ecto-sp13_S_contig714.18246.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
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BLAST of mRNA_Ecto-sp13_S_contig714.18246.1 vs. uniprot
Match: D8LN97_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN97_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.950e-7
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 0 
Query:    1 MEGSRKKTELCSQHAK-GEMVDVTHKRCGRPGCTKWPSYGVEGGSEKAEFCFQHAVD 56
            MEGS+     CS+H   G MV++  KRCG PGCTKWPSYGVEG  + A  C Q   D
Sbjct:   58 MEGSKN----CSRHGNPGMMVNLDVKRCGHPGCTKWPSYGVEG-CKMAGLCPQLTKD 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig714.18246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN97_ECTSI1.950e-754.39EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig714contigEcto-sp13_S_contig714:17741..17989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig714.18246.1mRNA_Ecto-sp13_S_contig714.18246.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig714 17741..17989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig714.18246.1 ID=prot_Ecto-sp13_S_contig714.18246.1|Name=mRNA_Ecto-sp13_S_contig714.18246.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
MEGSRKKTELCSQHAKGEMVDVTHKRCGRPGCTKWPSYGVEGGSEKAEFC
FQHAVDVVSKRCSHQRLNQSCAIQFAERNCKTR
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