prot_Ecto-sp13_S_contig71347.18240.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig71347.18240.1
Unique Nameprot_Ecto-sp13_S_contig71347.18240.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length220
Homology
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BLAST of mRNA_Ecto-sp13_S_contig71347.18240.1 vs. uniprot
Match: D7FVI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI4_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 1.800e-71
Identity = 126/140 (90.00%), Postives = 127/140 (90.71%), Query Frame = 0 
Query:    1 TSTNNTAPASETMPPPSTPXPSARDTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGGTSXXXXXXASDPWVWDESVCRRAAAGGHLGALKYARKQGCP 140
            TS N  APASETMPP   P  SA+DTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRL TGG   XXXXXXAS PWVWDESVCRRAAAGGHLGALKYARKQGCP
Sbjct:    5 TSNNKAAPASETMPP-MPPPASAQDTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLGTGGXXXXXXXXXASTPWVWDESVCRRAAAGGHLGALKYARKQGCP 143
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BLAST of mRNA_Ecto-sp13_S_contig71347.18240.1 vs. uniprot
Match: A0A6H5JXW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW6_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 3.020e-71
Identity = 122/141 (86.52%), Postives = 124/141 (87.94%), Query Frame = 0 
Query:    1 TSTNNTAPASETMPPPSTPXP-SARDTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGGTSXXXXXXASDPWVWDESVCRRAAAGGHLGALKYARKQGCP 140
            TS N  APASETMPP    X  SA+DTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWY+AWVGGQLPKNTCLGNVVESASRLAWASSRLSTGG TS      AS PWVWDESVCRRAAAGGHLGALKYARKQGCP
Sbjct:    5 TSKNKAAPASETMPPTXXXXXASAQDTLENNPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYRAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGSTSGG----ASTPWVWDESVCRRAAAGGHLGALKYARKQGCP 141
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BLAST of mRNA_Ecto-sp13_S_contig71347.18240.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.530e-14
Identity = 54/111 (48.65%), Postives = 62/111 (55.86%), Query Frame = 0 
Query:   30 NPLIDEDDILRHLIPFVADNEGYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGGTSXXXXXXASDPWVWDESVCRRAAAGGHLGALKYARKQGCP 140
            NPL D   ILRHLI F A N G+LFVAGV+ +W  AW G + P  T +   V+S SRL WA  R S  G               W  SVC RAA+GGHL  L+YAR  GCP
Sbjct:  726 NPLADPT-ILRHLISFAARN-GFLFVAGVSRSWRDAW-GVERPPETEVDAAVQSPSRLGWA--RASGLG---------------WGPSVCARAASGGHLATLRYARALGCP 816
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig71347.18240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVI4_ECTSI1.800e-7190.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXW6_9PHAE3.020e-7186.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXW1_9PHAE1.530e-1448.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 108..218
e-value: 6.2E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 117..216
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 117..216
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 118..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig71347contigEcto-sp13_S_contig71347:30..689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig71347.18240.1mRNA_Ecto-sp13_S_contig71347.18240.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig71347 30..689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig71347.18240.1 ID=prot_Ecto-sp13_S_contig71347.18240.1|Name=mRNA_Ecto-sp13_S_contig71347.18240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp
TSTNNTAPASETMPPPSTPPPSARDTLENNPLIDEDDILRHLIPFVADNE
GYLFVAGVASTWYKAWVGGQLPKNTCLGNVVESASRLAWASSRLSTGGGT
SGGAGGGASDPWVWDESVCRRAAAGGHLGALKYARKQGCPWDATCTREAA
AGGHLSLLRWAHANGCEWDASTPACAARYGDLDTLRFVRRNGCPWDKTTC
SEAARGGHLEILKWARSKVC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf