prot_Ecto-sp13_S_contig7111.18209.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7111.18209.1
Unique Nameprot_Ecto-sp13_S_contig7111.18209.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7111.18209.1 vs. uniprot
Match: D8LLS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS5_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.080e-42
Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 0 
Query:    1 MRRLLDKGVPIDAETEDGDTPLSLAISAGGVGSVGFLVKAGAALDLADKEGRSCLDLAAVMFSLFPEEVREEGFDVHPVI 80
            MRRLLDKGVPIDAETE+GDTPLSLAISAGGVGSVGFLVKAGAALDLADKEGR+CLDLAAVMFSLFP++VRE+G  VHPVI
Sbjct:   20 MRRLLDKGVPIDAETENGDTPLSLAISAGGVGSVGFLVKAGAALDLADKEGRNCLDLAAVMFSLFPKKVREKGVGVHPVI 99
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BLAST of mRNA_Ecto-sp13_S_contig7111.18209.1 vs. uniprot
Match: A0A6H5KV01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV01_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.300e-22
Identity = 53/73 (72.60%), Postives = 55/73 (75.34%), Query Frame = 0 
Query:    1 MRRLLDKGVPIDAETEDGDTPLSLAISAGGVGSVGFLVKAGAALDLADKEGRSCLDLAAVMFSLFPEEVREEG 73
            MRRLLDKGVPIDAETE+GDTPLSLAISAGGVGSVGFLVKAGAALDLADK     L      F L   +V  E 
Sbjct:    1 MRRLLDKGVPIDAETENGDTPLSLAISAGGVGSVGFLVKAGAALDLADKVIIRFLQNNGATFKLIDSDVIAES 73
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7111.18209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLS5_ECTSI1.080e-4291.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV01_9PHAE1.300e-2272.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13857Ank_5coord: 4..58
e-value: 2.3E-7
score: 31.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..68
e-value: 1.7E-13
score: 52.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..60
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 17..49
score: 10.927
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..59
score: 17.555

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7111contigEcto-sp13_S_contig7111:5510..6234 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7111.18209.1mRNA_Ecto-sp13_S_contig7111.18209.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7111 5510..6234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7111.18209.1 ID=prot_Ecto-sp13_S_contig7111.18209.1|Name=mRNA_Ecto-sp13_S_contig7111.18209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
MRRLLDKGVPIDAETEDGDTPLSLAISAGGVGSVGFLVKAGAALDLADKE
GRSCLDLAAVMFSLFPEEVREEGFDVHPVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom