prot_Ecto-sp13_S_contig7059.18129.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7059.18129.1
Unique Nameprot_Ecto-sp13_S_contig7059.18129.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length181
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7059.18129.1 vs. uniprot
Match: D7FRE0_ECTSI (DUF1084 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRE0_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 2.170e-86
Identity = 151/171 (88.30%), Postives = 153/171 (89.47%), Query Frame = 0 
Query:   10 PQLRHAVHLTCAQVGRVVMLWTAARVVWGLSTLTAVLEFQRLVGSATSLREQVYSILVVTLFLTTELYPLLAALDDELLLALSGAEDAAPKVGGGGTGGRNPGSGGSAIETARSGDQGRRSRTSRQLITASTTAVSALSGAGENNPMQPLLPRGGRRRDSWLSASSESELG 180
            P    A  L   +VGRVVMLWTAARVVWGLSTLTAVLEFQRLVGSATSLREQVYSILVVTLFLTTELYPLL ALDDELLLALSGAEDAAPKVGGGGTGGRN G  GSAIETAR  DQGRRSR +RQ ITASTTAVS LSGAGENNPMQPLLPRGGRRRDSWLSASSESELG
Sbjct:  206 PYKSEAAMLRMDRVGRVVMLWTAARVVWGLSTLTAVLEFQRLVGSATSLREQVYSILVVTLFLTTELYPLLGALDDELLLALSGAEDAAPKVGGGGTGGRNTGHRGSAIETARPEDQGRRSRAARQPITASTTAVSTLSGAGENNPMQPLLPRGGRRRDSWLSASSESELG 376
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BLAST of mRNA_Ecto-sp13_S_contig7059.18129.1 vs. uniprot
Match: A0A835Z1P3_9STRA (DUF1084 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.560e-9
Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 0 
Query:   21 AQVGRVVMLWTAARVVWGLSTLTAVLEFQRLVGSATSLREQVYSILVVTLFLTTELYPLLAALDDELLLALSGAEDAA 98
            A  GR +++WTA RV WG   LTA L++  L  S+ + +  +YS+L+V LFL TEL+P  AALDD++L  +  A  AA
Sbjct:  228 ALAGRALLIWTAGRVCWGAFALTAALQYS-LAASSAAEKAAIYSVLIVALFLVTELWPFAAALDDDVLAVVGEAAAAA 304
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7059.18129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRE0_ECTSI2.170e-8688.30DUF1084 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835Z1P3_9STRA1.560e-946.15DUF1084 domain-containing protein (Fragment) n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7059contigEcto-sp13_S_contig7059:4854..6666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7059.18129.1mRNA_Ecto-sp13_S_contig7059.18129.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7059 3617..7490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7059.18129.1 ID=prot_Ecto-sp13_S_contig7059.18129.1|Name=mRNA_Ecto-sp13_S_contig7059.18129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp
MRLYLVILCPQLRHAVHLTCAQVGRVVMLWTAARVVWGLSTLTAVLEFQR
LVGSATSLREQVYSILVVTLFLTTELYPLLAALDDELLLALSGAEDAAPK
VGGGGTGGRNPGSGGSAIETARSGDQGRRSRTSRQLITASTTAVSALSGA
GENNPMQPLLPRGGRRRDSWLSASSESELG*
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