prot_Ecto-sp13_S_contig7047.18113.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7047.18113.1
Unique Nameprot_Ecto-sp13_S_contig7047.18113.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7047.18113.1 vs. uniprot
Match: D7FKU1_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU1_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 2.360e-35
Identity = 113/135 (83.70%), Postives = 118/135 (87.41%), Query Frame = 0 
Query:    1 MIRSLIAAGANPNITSTQGLTPIGLAVNMGFDRCLAVLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKILTGSSPYPAKLRKRLTTNYKLDTPEGRCRQILLVSPAYKARSWQWPASTIATSA 135
            MIRSLIAAGANPNI STQGLTPIGLAVNMGFD        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  I T SSPY AKL+KRLTTNYKLDTPEGRCRQ++LV+ AY ARSWQWPAS +ATSA
Sbjct:  233 MIRSLIAAGANPNIISTQGLTPIGLAVNMGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNIHTDSSPYAAKLQKRLTTNYKLDTPEGRCRQVMLVAKAYNARSWQWPASALATSA 367
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7047.18113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKU1_ECTSI2.360e-3583.70Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 18..47
e-value: 20.0
score: 14.1
coord: 51..80
e-value: 71.0
score: 12.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..99
e-value: 3.9E-13
score: 51.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..79
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..77
score: 17.131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7047contigEcto-sp13_S_contig7047:36..470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7047.18113.1mRNA_Ecto-sp13_S_contig7047.18113.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7047 36..470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7047.18113.1 ID=prot_Ecto-sp13_S_contig7047.18113.1|Name=mRNA_Ecto-sp13_S_contig7047.18113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MIRSLIAAGANPNITSTQGLTPIGLAVNMGFDRCLAVLLRSGGSPHSNNS
TGPTLLQSAFLELYPTCLAFLLQAGANPEKILTGSSPYPAKLRKRLTTNY
KLDTPEGRCRQILLVSPAYKARSWQWPASTIATSANPDEQKEEDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom