prot_Ecto-sp13_S_contig704.18092.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig704.18092.1
Unique Nameprot_Ecto-sp13_S_contig704.18092.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length423
Homology
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BLAST of mRNA_Ecto-sp13_S_contig704.18092.1 vs. uniprot
Match: A0A6H5KCB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB4_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.160e-24
Identity = 173/234 (73.93%), Postives = 174/234 (74.36%), Query Frame = 0 
Query:   44 APVAPGQYNPATGQYAGYGTTTPAAPAPAXXXXXXXXXXXXXTPAAVAGSTAPTAASXXXXXXXXXXXXXXXXPGVYGAQPAYAGQQQQQQP--YGGPTSSQQTGAAPGTAVATPGAAAPSPYTGYGATAAAPVXXXXXXXXXXXXXAVXXXXXXXXXXTGYGTSQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGXXXXXXXXXXXSAATSRVGQQPATTTPASGR 275
            AP+APGQYNPATGQYAGYGTTT       XXXXXXXXXXXXX               XXXXXXXXXXXXXXX PGVYGAQPAYAGQ        YG P SSQQT AAPGTAVATPGA APSPYTGYG TA APV             AVXXXXXXX   TGYGTSQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXSAATSRVGQQPATTT ASGR
Sbjct:  463 APIAPGQYNPATGQYAGYGTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXTPGVYGAQPAYAGQXXXXXXXXYGDPASSQQTTAAPGTAVATPGATAPSPYTGYGVTAPAPVGAPAAATPTGYGAAVXXXXXXXDPATGYGTSQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXSAATSRVGQQPATTTDASGR 690
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig704.18092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KCB4_9PHAE3.160e-2473.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig704contigEcto-sp13_S_contig704:5819..7682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig704.18092.1mRNA_Ecto-sp13_S_contig704.18092.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig704 5817..7682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig704.18092.1 ID=prot_Ecto-sp13_S_contig704.18092.1|Name=mRNA_Ecto-sp13_S_contig704.18092.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=423bp
APAASASQPATAPAPSSNAAAAAAPGGYYGQQYAQQQQPGAAAAPVAPGQ
YNPATGQYAGYGTTTPAAPAPASTTAASQQQQQQQTPAAVAGSTAPTAAS
TPTAAGAATTPSAAAAPGVYGAQPAYAGQQQQQQPYGGPTSSQQTGAAPG
TAVATPGAAAPSPYTGYGATAAAPVGAPAAATPTGYGAAVTAGATATNPA
TGYGTSQQQQQQQYPGYGGYGGAAPTAAAAGSAAPAASSATGYGAATSSY
GSYASSAATSRVGQQPATTTPASGRGGTSNNPAASSSSSATGSANGPGSS
GAAASGGRSSRFSSSSSTPSSSSSATQAKSTPAGGASGYKPGASSSSSSS
NSRGAGGASGYKPSSAGSTPGSSAGGATKAGSSARGGSGGTATTSTGAAA
GTAAAAVAAAAPASSSGNASGGS
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