prot_Ecto-sp13_S_contig70214.18070.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70214.18070.1
Unique Nameprot_Ecto-sp13_S_contig70214.18070.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length35
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig70214.18070.1 vs. uniprot
Match: A0A6H5L6G0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6G0_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 4.640e-14
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:    1 MTVIGTDGRGEPKLAGETAVCGKWKGAFAMRLKQS 35
            MTVIGTDGRGEPKLAGETAVCGKWKGAFAMRL++S
Sbjct:  227 MTVIGTDGRGEPKLAGETAVCGKWKGAFAMRLQRS 261
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70214.18070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6G0_9PHAE4.640e-1494.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70214contigEcto-sp13_S_contig70214:573..677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70214.18070.1mRNA_Ecto-sp13_S_contig70214.18070.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70214 567..677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70214.18070.1 ID=prot_Ecto-sp13_S_contig70214.18070.1|Name=mRNA_Ecto-sp13_S_contig70214.18070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=35bp
MTVIGTDGRGEPKLAGETAVCGKWKGAFAMRLKQS
back to top