prot_Ecto-sp13_S_contig6974.17981.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6974.17981.1
Unique Nameprot_Ecto-sp13_S_contig6974.17981.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length648
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6974.17981.1 vs. uniprot
Match: D8LKF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF9_ECTSI)

HSP 1 Score: 965 bits (2495), Expect = 0.000e+0
Identity = 546/648 (84.26%), Postives = 558/648 (86.11%), Query Frame = 0 
Query:    1 MAGTLFPSPEPETPPIDRWARGWVASRSTTARDWDRFPRGSSSDDGSEGGRSLXXXXXTATGMTSVHRHXXXXXXXXXXXXRHRPHSSSCKEDPSGVPFPLAPEVREDQSLPPTIPGHSGRISRKGGDSGGKRXXXXXXXXXXXXXXXXXXXXQGSGGENESGCAWDGGTDGSDRQENDLDSRLKDLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDVQDKLTGGENGXXXXXXXXXXGGLDRGKRHRGGSGVGKTGGSISGPASFSKERKRSSLSLRKASRKRSSRRLSGRRRRGSGAFFELEPTLQPNLTNSLDRPGPGVSVSEGGSLKEGPSWPQDPEHMSRSEYRERQRRQDLSGSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLNSNAPGGVREGGGRRAVSGGXXXXXXXXVGRGTSITAFKDVNPFTGAIRVDTSPLAGGDGRGAAGAAATGGDLSPLTASVGGQSGRFLPRAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPHTRNPRDPRNVPARPNAHVSPKNSTSSRVDCNANPQYTGDDGGSTKSSFPSLPMSLTGWGEGRGGGSLGMGG-IPGRPTRGKKGRGMITMTKPKEIIVQGLLR 647
            MAGTLFPSPEPETPPIDRWARGWVASR TT RDWDRFPRGSSSDDGSEGGRSL     TATGMTS HRH XXXXX      RHRPHSSSCKED SGVPFPLAPEVREDQSLPPTIPGHS R+SRKGGDS  KR                    QGSGGE+ESGC WDGGTDGSDRQE+DLDSRLKDLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDV+DKL GGENG    XXXXXX  LD GKRHR GSGVGKT GSISG ASFSKERKRSSLSLR+ASR          RRRGSGAFFELEPTLQPNL NSLDRPGPGVSVS+GGSLKEGPSWPQDPEHMSRSEYRERQRRQDL+GSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLN NA  G    GG       XXXXXXX VGRGTSITAF+DVNPF G IRVDTSP AGGDGRGAAGA+ T GDLSPLTASVGGQSG F P AGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERP+TRNPRDPRNVPARPNAHVSPKNSTSSRV CNA+PQYTGDDGGSTKSSFPSLPMSLTGWGEG GGGSLG GG +PGRP RGKKGRGMITMTKPKEIIVQGLLR
Sbjct:    1 MAGTLFPSPEPETPPIDRWARGWVASRRTTVRDWDRFPRGSSSDDGSEGGRSLRSVRSTATGMTSAHRHGXXXXXHA----RHRPHSSSCKEDSSGVPFPLAPEVREDQSLPPTIPGHSVRMSRKGGDSRAKRGRGGHCAKRTGANRGEGGRRQGSGGESESGCLWDGGTDGSDRQEDDLDSRLKDLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDVRDKLAGGENGGGGVXXXXXXX-LDGGKRHRDGSGVGKTRGSISGSASFSKERKRSSLSLRRASRXXXXXXXXXXRRRGSGAFFELEPTLQPNLANSLDRPGPGVSVSDGGSLKEGPSWPQDPEHMSRSEYRERQRRQDLTGSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLNGNAAAGGGRDGGXXXXXXXXXXXXXXGVGRGTSITAFEDVNPFAGGIRVDTSPPAGGDGRGAAGASGTRGDLSPLTASVGGQSGSFFPGAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPYTRNPRDPRNVPARPNAHVSPKNSTSSRVGCNADPQYTGDDGGSTKSSFPSLPMSLTGWGEGGGGGSLGKGGGVPGRPMRGKKGRGMITMTKPKEIIVQGLLR 643
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6974.17981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF9_ECTSI0.000e+084.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6974contigEcto-sp13_S_contig6974:1535..6875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6974.17981.1mRNA_Ecto-sp13_S_contig6974.17981.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6974 1535..6875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6974.17981.1 ID=prot_Ecto-sp13_S_contig6974.17981.1|Name=mRNA_Ecto-sp13_S_contig6974.17981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=648bp
MAGTLFPSPEPETPPIDRWARGWVASRSTTARDWDRFPRGSSSDDGSEGG
RSLRSVRSTATGMTSVHRHGGGGAGGGGGHARHRPHSSSCKEDPSGVPFP
LAPEVREDQSLPPTIPGHSGRISRKGGDSGGKRGRGDRRGKRTGANRGQG
GRHQGSGGENESGCAWDGGTDGSDRQENDLDSRLKDLGGREWTIDGAGEL
LIVDRVQGDAMPKTVVSALYNFRDVQDKLTGGENGGGGGGRGDDDGGLDR
GKRHRGGSGVGKTGGSISGPASFSKERKRSSLSLRKASRKRSSRRLSGRR
RRGSGAFFELEPTLQPNLTNSLDRPGPGVSVSEGGSLKEGPSWPQDPEHM
SRSEYRERQRRQDLSGSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLN
SNAPGGVREGGGRRAVSGGRGSGGGGGVGRGTSITAFKDVNPFTGAIRVD
TSPLAGGDGRGAAGAAATGGDLSPLTASVGGQSGRFLPRAGPESSSVGET
SDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPHTRNP
RDPRNVPARPNAHVSPKNSTSSRVDCNANPQYTGDDGGSTKSSFPSLPMS
LTGWGEGRGGGSLGMGGIPGRPTRGKKGRGMITMTKPKEIIVQGLLR*
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