prot_Ecto-sp13_S_contig6955.17962.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6955.17962.1
Unique Nameprot_Ecto-sp13_S_contig6955.17962.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length40
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6955.17962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 1..12
score: 40.25
coord: 16..30
score: 28.11
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..32
score: 13.918
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..40
e-value: 6.6E-11
score: 44.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..39
NoneNo IPR availablePFAMPF13857Ank_5coord: 1..39
e-value: 2.1E-6
score: 27.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..40
score: 16.308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6955contigEcto-sp13_S_contig6955:1120..1239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6955.17962.1mRNA_Ecto-sp13_S_contig6955.17962.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6955 1120..1239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6955.17962.1 ID=prot_Ecto-sp13_S_contig6955.17962.1|Name=mRNA_Ecto-sp13_S_contig6955.17962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=40bp
GSTPLHTAAGKGMVAMARFFIRRGADVDALDQDDRTPVRL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom