prot_Ecto-sp13_S_contig6946.17942.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6946.17942.1
Unique Nameprot_Ecto-sp13_S_contig6946.17942.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length158
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6946.17942.1 vs. uniprot
Match: D8LF42_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF42_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 9.440e-101
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0 
Query:    1 HSWFKHKILSYSVTLHVPSLLATEKAKCGRAVNALRACVRSRDDAHSRGAEAVLERKEATSTVERLEEELREMQAKLDGATRLAEQLGREVEDCQQREYLEGRKIQGLTFRLMPEEILIRTLSYGSEEDEWLTVCKDWLEALSPSSGGSIDDAGSHE 157
            HSWFKHKILSYSVTLHVPSLLATEKAKCGRAVNALRACVRSRDDAHSRGAEAVLERKEA STVERLEEELREMQAKLDGATRLAEQLGREV+DCQQREYLEGRKIQGLTFRLMPEEILIRTLSYGSEEDEWLTVCKDWLEALSPS+GGSIDDAGSHE
Sbjct:  132 HSWFKHKILSYSVTLHVPSLLATEKAKCGRAVNALRACVRSRDDAHSRGAEAVLERKEAASTVERLEEELREMQAKLDGATRLAEQLGREVDDCQQREYLEGRKIQGLTFRLMPEEILIRTLSYGSEEDEWLTVCKDWLEALSPSAGGSIDDAGSHE 288
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BLAST of mRNA_Ecto-sp13_S_contig6946.17942.1 vs. uniprot
Match: A0A7S2V237_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V237_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 8.150e-18
Identity = 63/154 (40.91%), Postives = 91/154 (59.09%), Query Frame = 0 
Query:    1 HSWFKHKILSYSVTLHVPSLLATEKAKCGRAVNALRACVRSRDDAHS-RGAEAVLE--RKEATSTV-------ERLEEELREMQAKLDGATRLAEQLGREVEDCQQREYLEGRKIQGLTFRLMPEEILIRTLSYGSEE-DEWLTVCKDWLEALS 143
            +SWFK K+LSYSV LHVPS+   E+AKC RA+ A  AC   +DD  + +  E V E  +K+A   V       ERL ++L ++ A L+G  RL   +G++     QR  L  R+++GLTFRL+P  +L R L++   + D+W  VC DW   +S
Sbjct:  204 YSWFKEKLLSYSVDLHVPSVRGIERAKCERALAAFDAC---QDDLRAAQHEERVCEERKKQAAQKVAATRRDIERLSQQLADLTATLEGEMRL---IGQQA----QRANLRKRQLRGLTFRLLPLALLGRILAFADPKTDQWAVVCSDWHAVIS 347
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6946.17942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF42_ECTSI9.440e-10198.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V237_9STRA8.150e-1840.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6946contigEcto-sp13_S_contig6946:89..1717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6946.17942.1mRNA_Ecto-sp13_S_contig6946.17942.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6946 89..1717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6946.17942.1 ID=prot_Ecto-sp13_S_contig6946.17942.1|Name=mRNA_Ecto-sp13_S_contig6946.17942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
HSWFKHKILSYSVTLHVPSLLATEKAKCGRAVNALRACVRSRDDAHSRGA
EAVLERKEATSTVERLEEELREMQAKLDGATRLAEQLGREVEDCQQREYL
EGRKIQGLTFRLMPEEILIRTLSYGSEEDEWLTVCKDWLEALSPSSGGSI
DDAGSHE*
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