prot_Ecto-sp13_S_contig6936.17929.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6936.17929.1
Unique Nameprot_Ecto-sp13_S_contig6936.17929.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length459
Homology
BLAST of mRNA_Ecto-sp13_S_contig6936.17929.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 582 bits (1499), Expect = 1.900e-195
Identity = 291/322 (90.37%), Postives = 296/322 (91.93%), Query Frame = 0
Query:    1 MCRVVMLAPEEAVSIVRHLRNPALCILMNDESQNVKTLVSTLHCCFVRVNRGSGPFPPEDKEGEPWYVLRERSLRVKETVPDDPEAELMVSFLLGSTTLIPAKANQIELELRLQ-----------------TAEGVIFRTNLGERGETAVVFPNKRNTATILERWLPQSSERYLLLQDDKGVEPGLGQRRVGKMNRYIIAPGRPELYLPTGPLRKKSDWASNIIEVDEEGEGRYMGYTLNMVNPAARALLADKQTETTINVLPPCGVEIIMHAPEKKDGGKGKKKRKGTSEDLSRGGVDGGLRFLAILPFPVESAYDGGGGS 305
            MCRVVMLAPEEAVSIVRHLRNPALCILMNDESQNVKTL+STLHCCFVRVNRGSGPFP EDKEGEPWYVLRER LRVKETVPDDPEAELMVSFLLGS TLIPA ANQIELELRLQ                 TAEGVIFRTNLGERGETAV+FPNKR TAT LERWLPQSSER+LLLQDDKGVEPGLGQRRVGKMNRY++APGRPELYLPTGPLRKKSDWASN IEVD EGEGRYMGYTLNMVNPAARALLADKQTET INVLPPCGVEIIMHAPEKKDGGKGKKKRKGTSEDLSRGGVDGGLRFLAILPFPVESAYDGGGGS
Sbjct:  786 MCRVVMLAPEEAVSIVRHLRNPALCILMNDESQNVKTLISTLHCCFVRVNRGSGPFPLEDKEGEPWYVLRERLLRVKETVPDDPEAELMVSFLLGSKTLIPANANQIELELRLQDSAARDAAPASVAKSLETAEGVIFRTNLGERGETAVLFPNKRTTATTLERWLPQSSERHLLLQDDKGVEPGLGQRRVGKMNRYMVAPGRPELYLPTGPLRKKSDWASNTIEVDVEGEGRYMGYTLNMVNPAARALLADKQTETKINVLPPCGVEIIMHAPEKKDGGKGKKKRKGTSEDLSRGGVDGGLRFLAILPFPVESAYDGGGGS 1107          
BLAST of mRNA_Ecto-sp13_S_contig6936.17929.1 vs. uniprot
Match: D7FVP0_ECTSI (MYND finger protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP0_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 1.550e-122
Identity = 179/206 (86.89%), Postives = 187/206 (90.78%), Query Frame = 0
Query:  254 MHAPEKKDGGKGKKKRKGTSEDLSRGGVDGGLRFLAILPFPVESAYDGGGGSDELFVIVHTYEDHMLNPFVNVLQTSRADGAKLSRPLLSNWSFPVRSVADGRRLKVCEATKEYVHNMDLWLFEHGPLENMPLLHYHSLCRHMMSKFMSDGVKALEDGGVGAGGGQSPTGRYWHLVKVGYRASRTADAFFESVGPEMDKGVYVTVH 459
            MHAPEKKDGGKGKKKRKGTSEDLSRGGVDGGLRFLAILPFPVESAYDGGGG DELFVIVHTYEDHMLNPFVNVLQTSRADGAKLSRPLLSNWSFPVRSVADGRRLKVC+ATKE+VHNMD W FE GPLENMPL HYHSLCRHMM KFMSDGVK LE G      G+SPTGR+WHL KVG+  S +ADA FES+GPEMD+GVYVTVH
Sbjct:    1 MHAPEKKDGGKGKKKRKGTSEDLSRGGVDGGLRFLAILPFPVESAYDGGGGIDELFVIVHTYEDHMLNPFVNVLQTSRADGAKLSRPLLSNWSFPVRSVADGRRLKVCQATKEFVHNMDFWFFEDGPLENMPLFHYHSLCRHMMFKFMSDGVKVLEGGXXXXXXGKSPTGRHWHLAKVGHGTSSSADASFESMGPEMDRGVYVTVH 206          
BLAST of mRNA_Ecto-sp13_S_contig6936.17929.1 vs. uniprot
Match: A0A6H5JDD4_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD4_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 3.290e-80
Identity = 129/149 (86.58%), Postives = 134/149 (89.93%), Query Frame = 0
Query:  319 MLNPFVNVLQTSRADGAKLSRPLLSNWSFPVRSVADGRRLKVCEATKEYVHNMDLWLFEHGPLENMPLLHYHSLCRHMMSK--------FMSDGVKALEDGGVGAGGGQSPTGRYWHLVKVGYRASRTADAFFESVGPEMDKGVYVTVH 459
            MLNPFVNVLQTSR DGAKLSRPLLSNWSFPVRSVADGRRLKVCEATKEY+H+MDLWLFEHGPLENMPLLHYHSLCRHMMSK        FMSDGVKALEDGG GA GG++PTGR+WHL KVGY ASRTADAF ESVGPEMD GVYVTVH
Sbjct:    1 MLNPFVNVLQTSRTDGAKLSRPLLSNWSFPVRSVADGRRLKVCEATKEYMHSMDLWLFEHGPLENMPLLHYHSLCRHMMSKVEQRVSVQFMSDGVKALEDGGAGARGGKNPTGRHWHLAKVGYGASRTADAFLESVGPEMDIGVYVTVH 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6936.17929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE1.900e-19590.37DUF4470 domain-containing protein (Fragment) n=2 T... [more]
D7FVP0_ECTSI1.550e-12286.89MYND finger protein, putative n=1 Tax=Ectocarpus s... [more]
A0A6H5JDD4_9PHAE3.290e-8086.58MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6936contigEcto-sp13_S_contig6936:1..7836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6936.17929.1mRNA_Ecto-sp13_S_contig6936.17929.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6936 1..7866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6936.17929.1 ID=prot_Ecto-sp13_S_contig6936.17929.1|Name=mRNA_Ecto-sp13_S_contig6936.17929.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=459bp
MCRVVMLAPEEAVSIVRHLRNPALCILMNDESQNVKTLVSTLHCCFVRVN
RGSGPFPPEDKEGEPWYVLRERSLRVKETVPDDPEAELMVSFLLGSTTLI
PAKANQIELELRLQTAEGVIFRTNLGERGETAVVFPNKRNTATILERWLP
QSSERYLLLQDDKGVEPGLGQRRVGKMNRYIIAPGRPELYLPTGPLRKKS
DWASNIIEVDEEGEGRYMGYTLNMVNPAARALLADKQTETTINVLPPCGV
EIIMHAPEKKDGGKGKKKRKGTSEDLSRGGVDGGLRFLAILPFPVESAYD
GGGGSDELFVIVHTYEDHMLNPFVNVLQTSRADGAKLSRPLLSNWSFPVR
SVADGRRLKVCEATKEYVHNMDLWLFEHGPLENMPLLHYHSLCRHMMSKF
MSDGVKALEDGGVGAGGGQSPTGRYWHLVKVGYRASRTADAFFESVGPEM
DKGVYVTVH
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