prot_Ecto-sp13_S_contig6914.17902.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6914.17902.1
Unique Nameprot_Ecto-sp13_S_contig6914.17902.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length577
Homology
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: A0A6H5KZ19_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ19_9PHAE)

HSP 1 Score: 1056 bits (2732), Expect = 0.000e+0
Identity = 537/577 (93.07%), Postives = 551/577 (95.49%), Query Frame = 0
Query:    1 MESPVAEVASPLVEEPPAEEPGDAHGDAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTPEVVEPSARIFEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQCKHHLVGCEWKGARRESSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQRRAGSVFAAVYALLWRPPNWRLYHSPRPGGGVLSNVTLICLAPILFLALFGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGVAIGEFLLEGTARSMVYFALRGLPDWKRTPALVFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPLLL-VEPVAVKTHGTVVNGVVRGANMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSAGISLEDKARLKKRHDSIFRDLKTPLPNMTDRTTRRLIAAVCVCLFATIVAFVRDILQMVGYSRLLLSVLDSAHFRWELHVGRLVMRSLQQTRTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLLLMLTS 576
            MESP+AEVASP VEE PAEE GDAHGDAWSCP+CFMWFDMPV PPCQHTFCAGCLKSVVRAAAHRQRRS NTGP      LCREPFTPEVV+PSARIFEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQC HHLVGC W+GARR+ SLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQR+AGSVF AVYALLWRPPNWRLY SPRPGGGVLSNVTLICLAPILFLAL GAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKG+AIGEFLLEGTARSMVYFAL+GLPDWKRTPAL+FLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQP L  VEPVAVKTHGTVVNGVVRG  MLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMS+GI+L+DKARLKKRHDSIFRDL+TPLPNMTDRTTRRLIAAVCVCLFA IVAF RDILQMVGYSRLLLSVLDSAHFRWELHVGR+VM SLQQTRTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLL MLTS
Sbjct:    1 MESPLAEVASPPVEEAPAEESGDAHGDAWSCPVCFMWFDMPVFPPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQCMHHLVGCVWEGARRDLSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQRQAGSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALCGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTARSMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPVAVKTHGTVVNGVVRGTTMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSSGIALDDKARLKKRHDSIFRDLRTPLPNMTDRTTRRLIAAVCVCLFAIIVAFFRDILQMVGYSRLLLSVLDSAHFRWELHVGRVVMGSLQQTRTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLLFMLTS 577          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: UPI001425A99E (ligand of Numb protein X 2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425A99E)

HSP 1 Score: 69.7 bits (169), Expect = 8.190e-9
Identity = 47/163 (28.83%), Postives = 70/163 (42.94%), Query Frame = 0
Query:   23 DAHGDAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTPEVVEPSARIFEEML-KATVTCRNGDCAAQFCPLRWKKHQEE------CPSAVVQCKHHLVGCEWKGARRESSLHVEGCAYEKIKGLIPRVSASLKQI 178
            +A  +  +C IC      P    C HT+CA C++SV+R   HRQ            CP+ R P T +   PS+ I + ML K  V C N      +C    ++   E      C   +  C H   GC ++G+R     H+  C + K KG++   +  L  I
Sbjct:   35 EAVDEDLTCHICLQPLVNPTDTTCGHTYCAKCIRSVLRV--HRQ------------CPVDRSPLTAQDCRPSSLIIKRMLDKLPVVCPN----TTYCDDAMQRSDLEAHLANRCKGNMSHCIHAAHGCTFRGSRTALESHIRECPHAKQKGVVAIKTGGLTTI 179          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: UPI001864CCD0 (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864CCD0)

HSP 1 Score: 61.2 bits (147), Expect = 2.680e-6
Identity = 49/149 (32.89%), Postives = 64/149 (42.95%), Query Frame = 0
Query:   27 DAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTPEVVEPSARIFEEM---LKATVT------CRNGDCAAQFCPLRWKKHQEECPSAVVQ-CKHHLVG-CEWKGARRESSLHVEGCAYEKI 164
            D ++C IC    + PV+ PC HT+C GC+K       H       TG    +CP CRE FTP  V     +F E+   LK TV          GD A   C +R +K    C   +   C+ HL    E    +R   + V G   EKI
Sbjct:   19 DQFTCSICLDLLNDPVTIPCGHTYCMGCIKGCWDQDDH-------TGVY--SCPQCRETFTPRPVLNKNTMFAEVVENLKKTVAPSAHCYAGPGDVACDVCAVRKRKASTSCLVCLASYCETHLQPHYESPAFKRHKLVQVTGNLQEKI 158          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: UPI0015ABDF20 (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015ABDF20)

HSP 1 Score: 60.1 bits (144), Expect = 1.120e-5
Identity = 52/161 (32.30%), Postives = 67/161 (41.61%), Query Frame = 0
Query:   18 AEEPGDAHGDAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTP-----------EVVEPSARI-FEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQ-CKHHLVG-CEWKGARRESSLHVEGCAYEKI 164
            AE  G    D +SCPIC      PV+ PC H+FC GC+K       H       TG    +CP CRE FTP           EVVE   +   +    A      GD A  FC  R +K  + C   +V  C+ HL    E+   ++   +   G   EKI
Sbjct:  629 AEGGGLLDQDQFSCPICLDVLKDPVTIPCGHSFCIGCIKGCWDQDDH-------TGVY--SCPQCRETFTPRPDLRKNIMFAEVVEKLKKTGLQAAPPAHCYAGPGDVACDFCTGRKRKAVKSCLVCLVSYCETHLQPHYEFPALKKHKLVKATGNLQEKI 780          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: A0A4W4DRJ9_ELEEL (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4DRJ9_ELEEL)

HSP 1 Score: 58.5 bits (140), Expect = 2.060e-5
Identity = 37/110 (33.64%), Postives = 51/110 (46.36%), Query Frame = 0
Query:   30 SCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPF-TPEVVEPSARI-----FEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAV 133
            SC IC   +  PVS PC H++C GC+ SV R+ A         G P P CP CR+PF +PE +  + ++      E  + A  TC    C    C     +H E+  S  
Sbjct:   14 SCAICLQLYQDPVSLPCGHSYCLGCMHSVQRSCA--------PGSP-PCCPECRQPFESPEGLPRNFKLSGIQCLESTVPAAKTCVR--CNTPLCQAHLSRHLEQARSCA 112          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: UPI001B7E5DAD (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E5DAD)

HSP 1 Score: 55.8 bits (133), Expect = 2.930e-5
Identity = 48/170 (28.24%), Postives = 72/170 (42.35%), Query Frame = 0
Query:   27 DAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTPEVV----EPSARIFEEMLKATV------TCRN-GDCAAQFCPLRWKKHQEECPSAVVQ-CKHHLVGCEWKGARRESSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQ 184
            D +SC +C      PV+ PC H++C GC+K+      H       TG    +CP CRE FTP  V       A + EE+ K  +      +C   GD    FC  R  K  + C + +   C+ H+              H EG A+++ K  +   + +L+Q     HQ
Sbjct:   11 DQFSCSVCLAILKHPVTIPCGHSYCMGCIKNYWDHTDH-------TGVY--SCPQCRETFTPRPVLCRNTMLAEVVEELKKTGLNNTLAQSCAGPGDVPCDFCTGRRFKAVKSCLTCLASYCETHVKP------------HYEGAAFKRHK--LVNATGNLEQKLCAEHQ 157          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: UPI0015B1D8D2 (tripartite motif-containing protein 16-like isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B1D8D2)

HSP 1 Score: 57.8 bits (138), Expect = 4.380e-5
Identity = 51/161 (31.68%), Postives = 67/161 (41.61%), Query Frame = 0
Query:   18 AEEPGDAHGDAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTP-----------EVVEPSARI-FEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQ-CKHHLVG-CEWKGARRESSLHVEGCAYEKI 164
            AE  G    D +SCPIC      PV+ PC H+FC GC+K           +  NTG    +CP CR+ FTP           EVVE   +  F+    A      GD A  FC  R  K  + C   +   C+ HL    E+   ++   +   G   EKI
Sbjct:   22 AEGGGLLDQDQFSCPICLDLLTDPVTIPCGHSFCLGCIKGYWD-------QDDNTGVY--SCPQCRQTFTPRPVLGRNIMLAEVVENLKKTGFQTAPPAHCYAGPGDVACDFCTGRKCKAVKSCLMCLASYCETHLQPHYEFPALKKHKLVKAIGNLQEKI 173          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: A0A4D9DKV1_9SAUR (Interferon-inducible GTPase 5-like n=9 Tax=Testudinoidea TaxID=8486 RepID=A0A4D9DKV1_9SAUR)

HSP 1 Score: 57.0 bits (136), Expect = 6.710e-5
Identity = 45/157 (28.66%), Postives = 61/157 (38.85%), Query Frame = 0
Query:   27 DAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREP-----FTP--------------------EVVEPSARIFE--------------EMLKATVTCRNGDCAAQFCPLRWK--KHQEECPSAVVQCKHHLVG 142
            + +SCP+C  W   PV+ PC H +C GC+++               G P PACP CREP     + P                    E   P  R  E              E+ +AT T  N     +F P+     +HQEE PSA+ Q +  L G
Sbjct:   13 EEFSCPVCLDWLQDPVTLPCGHVYCQGCIETTWGTL----------GVP-PACPECREPCPDRRYAPCRLLRKLIGQARGLSPGGAEEGAHPGGRCQEHSEPWRGAGGAFAGELCRATATYEN----LRFLPIHQATGQHQEELPSAIAQLESSLAG 154          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: UPI001560DC18 (E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI001560DC18)

HSP 1 Score: 55.1 bits (131), Expect = 7.530e-5
Identity = 44/151 (29.14%), Postives = 62/151 (41.06%), Query Frame = 0
Query:   27 DAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTPEVVEPSARIFEEMLKATVTCR-----------NGDCAAQFCPLRWKKHQEECPSAVVQ-CKHHLVG-CEWKGARRESSLHVEGCAYEKI 164
            D +SCP+C      PVS PC H++C GC+K+    A         TG    +CP CRE FTP  V     +  E+++     R            GD    FC  R  K    C + +V  C+ H+    E    +R   +   G   +KI
Sbjct:    9 DKFSCPVCLDLLKNPVSIPCGHSYCMGCIKNYWDQADQ-------TGVY--SCPQCRETFTPRPVLRRNTMLAELVEHFKMTRLNPPPAQSYAGPGDVPCDFCTGRKFKAVNSCLTCLVSYCETHVKPHLEVAALKRHKLIEATGNLEQKI 150          
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Match: UPI0015AEF34B (tripartite motif-containing protein 16-like n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AEF34B)

HSP 1 Score: 56.6 bits (135), Expect = 9.830e-5
Identity = 42/127 (33.07%), Postives = 54/127 (42.52%), Query Frame = 0
Query:   27 DAWSCPICFMWFDMPVSPPCQHTFCAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTP-----------EVVEPSARI-FEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQ-CKHHL 140
            D +SCPIC      PV+ PC H++C GC+K      AH       TG    +CP CRE FTP           EVVE   +   +    A      GD    FC  R +K  + C   +   C+ HL
Sbjct:   11 DQFSCPICLDLLKDPVTVPCGHSYCLGCIKGYWDQDAH-------TGVY--SCPQCRETFTPRPDLRKNIMFAEVVEKLKKTGLQAAPPAHCYAGPGDVVCDFCTGRKRKAVKSCLVCLASYCETHL 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6914.17902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KZ19_9PHAE0.000e+093.07RING-type domain-containing protein n=2 Tax=Ectoca... [more]
UPI001425A99E8.190e-928.83ligand of Numb protein X 2-like n=1 Tax=Anneissia ... [more]
UPI001864CCD02.680e-632.89E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Mega... [more]
UPI0015ABDF201.120e-532.30E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Angu... [more]
A0A4W4DRJ9_ELEEL2.060e-533.64E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Elec... [more]
UPI001B7E5DAD2.930e-528.24E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Poly... [more]
UPI0015B1D8D24.380e-531.68tripartite motif-containing protein 16-like isofor... [more]
A0A4D9DKV1_9SAUR6.710e-528.66Interferon-inducible GTPase 5-like n=9 Tax=Testudi... [more]
UPI001560DC187.530e-529.14E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=Ac... [more]
UPI0015AEF34B9.830e-533.07tripartite motif-containing protein 16-like n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 355..375
NoneNo IPR availablePANTHERPTHR46016FAMILY NOT NAMEDcoord: 20..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 357..480
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 328..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 339..356
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..261
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 273..288
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 557..575
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 502..556
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 481..501
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 576..576
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 24..89
NoneNo IPR availableTMHMMTMhelixcoord: 481..498
NoneNo IPR availableTMHMMTMhelixcoord: 557..574
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 31..82
e-value: 1.9E-7
score: 40.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 31..83
score: 11.162
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 23..141
e-value: 1.1E-17
score: 66.0
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 31..64
e-value: 1.9E-9
score: 37.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 46..55
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 104..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6914contigEcto-sp13_S_contig6914:507..4058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6914.17902.1mRNA_Ecto-sp13_S_contig6914.17902.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6914 2..4058 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6914.17902.1 ID=prot_Ecto-sp13_S_contig6914.17902.1|Name=mRNA_Ecto-sp13_S_contig6914.17902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=577bp
MESPVAEVASPLVEEPPAEEPGDAHGDAWSCPICFMWFDMPVSPPCQHTF
CAGCLKSVVRAAAHRQRRSRNTGPPRPACPLCREPFTPEVVEPSARIFEE
MLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQCKHHLVGCEWKGARR
ESSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTR
ALLAHQRRAGSVFAAVYALLWRPPNWRLYHSPRPGGGVLSNVTLICLAPI
LFLALFGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQ
TPSLLKGVAIGEFLLEGTARSMVYFALRGLPDWKRTPALVFLLAPLFYPT
VVQAVHRFEVQVKNAHNQAQRARAQPLLLVEPVAVKTHGTVVNGVVRGAN
MLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSAGISLE
DKARLKKRHDSIFRDLKTPLPNMTDRTTRRLIAAVCVCLFATIVAFVRDI
LQMVGYSRLLLSVLDSAHFRWELHVGRLVMRSLQQTRTNQDPNFARTRAR
DLLRSRLLLLWVVVGSSFFLLLMLTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR017907Znf_RING_CS
IPR008974TRAF-like