prot_Ecto-sp13_S_contig68547.17817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68547.17817.1
Unique Nameprot_Ecto-sp13_S_contig68547.17817.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: UPI001420EBFE (lysylphosphatidylglycerol synthase domain-containing protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001420EBFE)

HSP 1 Score: 318 bits (815), Expect = 2.490e-107
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0
Query:    1 MTRFLLRAAAWLLPLAALLYLGFALSHLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEILGHLSAVAVILLALLPFSLTGLADLLSFAAPQLPLWALVAAFSLLAVLLFLLLS 179
            MTR LLRAAAWLLPLAALLYLGFALSHLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEILGHLSAV VILLALLPFSLTGLADLLSFAAPQLPLWALVAAFSLLAVLLF+LLS
Sbjct:    1 MTRVLLRAAAWLLPLAALLYLGFALSHLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEILGHLSAVGVILLALLPFSLTGLADLLSFAAPQLPLWALVAAFSLLAVLLFMLLS 179          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: W4HPU4_9RHOB (Uncharacterized protein n=3 Tax=Roseivivax marinus TaxID=1379903 RepID=W4HPU4_9RHOB)

HSP 1 Score: 65.5 bits (158), Expect = 2.040e-9
Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 0
Query:   16 AALLYLGFALSHLDLSEFGGYL-----SNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEI 125
            AAL+ +  AL   +L  FG        +  +L  A  A+++Y A L L A AWS  L++ +  P+   AAV +YA     KYLPGNVFH+ GRQ+ A   G+  +A   AS LE+
Sbjct:   12 AALVVVSLALLARELWRFGPEALRLAATPGLLAGAVAASIVYAALLTLPAAAWSCALRERADAPLVSGAAVLVYARCNILKYLPGNVFHFGGRQVMAREAGWSHRATFLASALEV 126          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: A0A1B1PZV7_9CHLB (Uncharacterized protein n=1 Tax=Prosthecochloris sp. CIB 2401 TaxID=1868325 RepID=A0A1B1PZV7_9CHLB)

HSP 1 Score: 65.1 bits (157), Expect = 2.630e-9
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 0
Query:   26 SHLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEILGHLSAV 132
            + LDLS    +L   + G+A +    YG+  +LLA AW   L +F   P S + A+++Y  +  AKYLPGN+FH AGRQ      GY  KA A++++ E LG L+ V
Sbjct:   33 AELDLSRLDSWLFVAMGGLAIV----YGSANFLLAEAWRQLLIQFGEYP-SGKWAIRIYGISQIAKYLPGNIFHLAGRQAYGTSDGYDAKALAKSAVWE-LGLLAVV 133          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: A0A440BKB9_9HYPH (Uncharacterized protein n=5 Tax=Mesorhizobium TaxID=68287 RepID=A0A440BKB9_9HYPH)

HSP 1 Score: 62.8 bits (151), Expect = 1.710e-8
Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 0
Query:   12 LLPLAALLYLGFALS----HLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEI 125
            LL LA +L++G  L      +D    G   +   L IA +A  LYGA   LLA  W   L    + PVS   A+  YA + FAKY+PGN+F +AGRQ      G G    A++++ E+
Sbjct:   17 LLGLAGVLFVGIRLQGYAGEIDFRRLG---AGGYLAIAALAG-LYGASNLLLALGWQKLLHHL-QTPVSRSWAIHAYAISQFAKYVPGNIFQFAGRQAIGVAAGIGNGPLAKSTVYEL 129          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: UPI0011AF9AE1 (hypothetical protein n=1 Tax=unclassified Leclercia TaxID=2627398 RepID=UPI0011AF9AE1)

HSP 1 Score: 62.4 bits (150), Expect = 2.220e-8
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   40 RVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEIL 126
            ++L +  + A +YGA   LLA AW   L K     +S   A ++Y     AKY+PGN+F +AGRQ+ A   G+  KA A+++ LE+L
Sbjct:   44 KLLALLMLLAAIYGAANALLASAWR-ILMKSLGQAISGRTATRIYGLTQLAKYVPGNIFQFAGRQLLAMSYGFSGKAIAKSAFLELL 129          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: A0A3A5K5V2_9HYPH (Uncharacterized protein n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A3A5K5V2_9HYPH)

HSP 1 Score: 60.8 bits (146), Expect = 8.040e-8
Identity = 53/145 (36.55%), Postives = 72/145 (49.66%), Query Frame = 0
Query:   12 LLPLAALLYLGFALSHLDLSEF-------GGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEILGHLSAVAVILLALLPFSLTGLAD 149
            LL LA ++++G  L H+   E        GGY++  VL      A LYGA   LLA  W   L      PVS   AV+ YA +  AKY+PGN+F +AGRQ      G G    A+++ LE+   +   A+ L  LLP    G+ D
Sbjct:   17 LLGLAGVVFVGTRL-HVYAGEIDFRRMGAGGYVAIAVL------AGLYGASNLLLALGWRRLLAHLG-VPVSYSWAVRAYAISQLAKYVPGNIFQFAGRQAIGLSAGIGNAPLAKSTALELALLVVGGALFLTLLLPLIAAGIPD 153          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: A0A440MCK2_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A440MCK2_9HYPH)

HSP 1 Score: 60.8 bits (146), Expect = 8.260e-8
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   12 LLPLAALLYLGFAL----SHLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYG 113
            LL LA ++++G  L    S +D   FG   +   + IA +A  LYGA   LLA  W   L    + PVS   A+  YA +  AKY+PGN+F +AGRQ     +G G
Sbjct:   17 LLGLAGVVFVGIRLQGYASEIDFRRFG---AGGYVAIAALAG-LYGASNLLLALGWQKLLHHL-QTPVSRSWAIHAYAVSQLAKYVPGNIFQFAGRQAIGLAVGIG 117          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: A0A7W3BRQ7_9ENTR (Uncharacterized protein n=1 Tax=Citrobacter sp. RHBSTW-00271 TaxID=2742642 RepID=A0A7W3BRQ7_9ENTR)

HSP 1 Score: 60.8 bits (146), Expect = 8.480e-8
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = 0
Query:    3 RFLLRAAAWLLPLAALLYLGFALS----HLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEIL 126
            R+LL      L +A +L++G+ L      LDLS+    ++    G+    A++YGA  +LLA+AW   LQ F +   S   +V++Y  +  AKY+PGN+FH AGRQ      G   K+  Q+ L E++
Sbjct:   13 RYLLNWVGSGLAIAGILFIGYRLHSYWLELDLSK----ITLLGWGLIFFLAVVYGAANFLLAYAWWQLLQHFCKYG-SIANSVKIYGKSQLAKYVPGNIFHLAGRQALGMSAGIPTKSLVQSMLWELI 135          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: A0A2N5EM09_9GAMM (Uncharacterized protein n=4 Tax=Yersiniaceae TaxID=1903411 RepID=A0A2N5EM09_9GAMM)

HSP 1 Score: 60.1 bits (144), Expect = 1.570e-7
Identity = 42/100 (42.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:   26 SHLDLSEFGGYLSNRVLGIACIAALLYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEI 125
            S LD + FG       LG+A  AAL YGA   LLAF W+  L  F +    P   V +Y     AKYLPGN+FH+AGRQ      G    A A+++L E+
Sbjct:   33 SQLDPARFG---PAAWLGMAA-AALAYGAANLLLAFGWAQLLACFHQR-CRPRWVVGIYGVTQLAKYLPGNIFHFAGRQALGMAAGLPGGALAKSTLWEL 127          
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Match: L0KTF3_MESAW (Uncharacterized protein n=6 Tax=Mesorhizobium TaxID=68287 RepID=L0KTF3_MESAW)

HSP 1 Score: 59.7 bits (143), Expect = 2.110e-7
Identity = 48/149 (32.21%), Postives = 70/149 (46.98%), Query Frame = 0
Query:    7 RAAAWLLPLAALLYL-GFALSHLDLSEFGGYLSNRVLGIACIAALLYGAGLY-----LLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHYAGRQIAAARLGYGQKAPAQASLLEILGHLSAVAVILLALLPFSLTGLAD 149
            RA  WL  + A L L G     + L  + G +  R +G A   A++  AG+Y     LLA  W   L      PVS   A++ YA +  AKY+PGN+F +AGRQ      G G     +++  E+   +    +    +LP  +TGL D
Sbjct:    6 RAKTWLNRIGAFLGLAGVVFVGIRLQGYTGEIDFRRMGAASYTAIIALAGVYGVSNLLLALGWRHLLHHLGA-PVSRPWAIRTYAISQLAKYVPGNIFQFAGRQAIGVAAGIGNGPLVKSTAYEVAALIVGGLLFSPLVLPLVVTGLPD 153          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68547.17817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001420EBFE2.490e-10798.32lysylphosphatidylglycerol synthase domain-containi... [more]
W4HPU4_9RHOB2.040e-939.13Uncharacterized protein n=3 Tax=Roseivivax marinus... [more]
A0A1B1PZV7_9CHLB2.630e-940.19Uncharacterized protein n=1 Tax=Prosthecochloris s... [more]
A0A440BKB9_9HYPH1.710e-837.29Uncharacterized protein n=5 Tax=Mesorhizobium TaxI... [more]
UPI0011AF9AE12.220e-839.08hypothetical protein n=1 Tax=unclassified Leclerci... [more]
A0A3A5K5V2_9HYPH8.040e-836.55Uncharacterized protein n=3 Tax=Mesorhizobium TaxI... [more]
A0A440MCK2_9HYPH8.260e-838.68Uncharacterized protein n=1 Tax=Mesorhizobium sp. ... [more]
A0A7W3BRQ7_9ENTR8.480e-835.16Uncharacterized protein n=1 Tax=Citrobacter sp. RH... [more]
A0A2N5EM09_9GAMM1.570e-742.00Uncharacterized protein n=4 Tax=Yersiniaceae TaxID... [more]
L0KTF3_MESAW2.110e-732.21Uncharacterized protein n=6 Tax=Mesorhizobium TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 149..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..178
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 159..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68547contigEcto-sp13_S_contig68547:103..639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68547.17817.1mRNA_Ecto-sp13_S_contig68547.17817.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68547 103..639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68547.17817.1 ID=prot_Ecto-sp13_S_contig68547.17817.1|Name=mRNA_Ecto-sp13_S_contig68547.17817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
MTRFLLRAAAWLLPLAALLYLGFALSHLDLSEFGGYLSNRVLGIACIAAL
LYGAGLYLLAFAWSACLQKFSRNPVSPEAAVQLYAFATFAKYLPGNVFHY
AGRQIAAARLGYGQKAPAQASLLEILGHLSAVAVILLALLPFSLTGLADL
LSFAAPQLPLWALVAAFSLLAVLLFLLLS
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