prot_Ecto-sp13_S_contig6819.17764.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6819.17764.1
Unique Nameprot_Ecto-sp13_S_contig6819.17764.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length866
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6819.17764.1 vs. uniprot
Match: D7G1S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S9_ECTSI)

HSP 1 Score: 1045 bits (2703), Expect = 0.000e+0
Identity = 547/632 (86.55%), Postives = 568/632 (89.87%), Query Frame = 0 
Query:  234 MFCRFVEGKKFDGQESLEGFLRTLSRAGRSEVPVAAGGGVAAHNERPSYAQDRACSSDLMERRQKMSVEGGEWETMGSARWGARGLRRASTQFTHNTSSPNHSDLVPSTTKTRDGRRAKVLPQERSGVAVNKLFMGITGAVETHRSADVGTSARSTGVRLHLSL-RSRNPTVKWDVASSGGEPKTPTRCRFGPRGGGFVLRALSSFDGNGSGTLSSADFVSAASKVAGVDMQIEQEWGDVLATKFAATTHRREVGGGVRWLGESEEGTGTRRLDIAALADFLRPKHFSLSVMTPFGLVELSLDDEFLTLGDLREVIVNKMFWRQHNCQVRRLDRDNFTLSRFYGTLPLDTESAGQRRRLVLDVLRPGELLFVTDRAAHHTRQEPQRSIPRFQYMMGMQRQQAGRVATPAIVKHASCKDMSIATKPPPCGAVTRTRWSSAGTVTAGSTGAGELPRRSSCIPSSPPVRRQFVDDGTAAAEGSISERPTTSVARASGELLSQTATRIVSEPPSRDRAYARRRIRGRGSTSLNGGGSRVVRCDLAGKSSNGGAEEKRGRKTASFHDPSAAREPPSTKGTRKTAVEASCVFDWSAGQVEGWVGETMELGCYQAAFQAKKAGWESFLAYGRGKRFRRT 864
            MFCRFVEGKKFDGQESLEGFLRTLSRAGRSEVPVAAGGG AAHNERP+YA DRA SSDLMERRQ+MSVEGG WET+GSARWGARGLRRASTQFTHNTS PNHSDLVPSTTKT  GRRA VLPQ   GVAV K F G+TG VETHRSADVGTSARSTG  LHLS  RSRN T+KW+VASSGGE KTPTR R GPRGGGFV+RALSS DGNGSGTLS A+FVSAASKVAG+DMQIEQEWGDVLATKFAATTHR E GGGVRWLG S EGT T  LDIAAL DFLRPKHFSLSVMTPFGLVELSL+D+FLTLGDLREVI+NKMFWRQHNCQVRR DRDNFTLSR+YGTLPLDTESAGQRRRLVLDVLRPGELLFVTDR AHHTRQE QRSIPRFQYMMGMQRQQ G+ ATPAIVKHA CK MSIATKPPPCGAV + RWSSA T T GSTGAGELPRRSSCIPSSPP RRQFVDDGTAAAEGSI ERPTTSV RAS E+LSQTATRIVSEPPSRDR+YARRR    GSTS NGGGSRV R DLAGKSS+GGAEEKRGRKTASFHDPS AR PPSTKGT+KTAVEAS VFDWSAGQVE WVGETMELGCY+ AFQAKKAGWE FLAYGRG+  RRT
Sbjct:    1 MFCRFVEGKKFDGQESLEGFLRTLSRAGRSEVPVAAGGGAAAHNERPAYAHDRAYSSDLMERRQRMSVEGGAWETVGSARWGARGLRRASTQFTHNTSPPNHSDLVPSTTKTSVGRRATVLPQAHGGVAVKKRFSGVTGTVETHRSADVGTSARSTGGGLHLSTSRSRNSTLKWEVASSGGELKTPTRDRSGPRGGGFVVRALSSVDGNGSGTLSPAEFVSAASKVAGLDMQIEQEWGDVLATKFAATTHRGEAGGGVRWLGGSGEGTDTHALDIAALDDFLRPKHFSLSVMTPFGLVELSLEDQFLTLGDLREVIINKMFWRQHNCQVRRSDRDNFTLSRYYGTLPLDTESAGQRRRLVLDVLRPGELLFVTDRVAHHTRQETQRSIPRFQYMMGMQRQQPGKAATPAIVKHARCKGMSIATKPPPCGAVPKRRWSSAKTATTGSTGAGELPRRSSCIPSSPPARRQFVDDGTAAAEGSIPERPTTSVVRASAEILSQTATRIVSEPPSRDRSYARRRAGDTGSTSSNGGGSRVARGDLAGKSSDGGAEEKRGRKTASFHDPSPARGPPSTKGTQKTAVEASFVFDWSAGQVERWVGETMELGCYREAFQAKKAGWEGFLAYGRGEHLRRT 632
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6819.17764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1S9_ECTSI0.000e+086.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 439..451

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6819contigEcto-sp13_S_contig6819:6..4278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6819.17764.1mRNA_Ecto-sp13_S_contig6819.17764.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6819 6..4278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6819.17764.1 ID=prot_Ecto-sp13_S_contig6819.17764.1|Name=mRNA_Ecto-sp13_S_contig6819.17764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=866bp
ALAAIARTEAAGLDLVALEVRQALRAEARRVAPRSCPSAASALFQELDPD
AKGFVTTTDLARVSCRLLGLSPERTAEQSPRATSMSSQATTSACTTARSG
RRSALSIGATAQQSTASGDVATLLSWSSTSSGRSRIRQVFSAIYRFARTA
EVTASSPTQEREKKDIRGSGRHEQPMRVCQGHSGPLWTDRVSEQTAAVLA
PPAVNTSYSGGAPINRRLDGMREDVGETPITLSMFCRFVEGKKFDGQESL
EGFLRTLSRAGRSEVPVAAGGGVAAHNERPSYAQDRACSSDLMERRQKMS
VEGGEWETMGSARWGARGLRRASTQFTHNTSSPNHSDLVPSTTKTRDGRR
AKVLPQERSGVAVNKLFMGITGAVETHRSADVGTSARSTGVRLHLSLRSR
NPTVKWDVASSGGEPKTPTRCRFGPRGGGFVLRALSSFDGNGSGTLSSAD
FVSAASKVAGVDMQIEQEWGDVLATKFAATTHRREVGGGVRWLGESEEGT
GTRRLDIAALADFLRPKHFSLSVMTPFGLVELSLDDEFLTLGDLREVIVN
KMFWRQHNCQVRRLDRDNFTLSRFYGTLPLDTESAGQRRRLVLDVLRPGE
LLFVTDRAAHHTRQEPQRSIPRFQYMMGMQRQQAGRVATPAIVKHASCKD
MSIATKPPPCGAVTRTRWSSAGTVTAGSTGAGELPRRSSCIPSSPPVRRQ
FVDDGTAAAEGSISERPTTSVARASGELLSQTATRIVSEPPSRDRAYARR
RIRGRGSTSLNGGGSRVVRCDLAGKSSNGGAEEKRGRKTASFHDPSAARE
PPSTKGTRKTAVEASCVFDWSAGQVEGWVGETMELGCYQAAFQAKKAGWE
SFLAYGRGKRFRRTW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS