prot_Ecto-sp13_S_contig6788.17717.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6788.17717.1
Unique Nameprot_Ecto-sp13_S_contig6788.17717.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6788.17717.1 vs. uniprot
Match: D7FWR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR5_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 2.890e-59
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 
Query:    1 MSAVEARTSQLKAFMINADTSRSVLDVSKLWISRRMLVAEATLLRAYGGVGPTARAQDAIRQGRRVRLRRIFRAFETAWRENLMSRPPEETLETIESSDCIG 102
            +SAVEARTSQL+AFMINADTSRSVLDVSKLWISRRMLVAE TLLRAYGGVGPTARAQDAIRQGRRVRLRRIFRAFETAWRENLMSRPPEETLE IESSDCIG
Sbjct:  173 ISAVEARTSQLRAFMINADTSRSVLDVSKLWISRRMLVAETTLLRAYGGVGPTARAQDAIRQGRRVRLRRIFRAFETAWRENLMSRPPEETLERIESSDCIG 274
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6788.17717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWR5_ECTSI2.890e-5996.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6788contigEcto-sp13_S_contig6788:428..1721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6788.17717.1mRNA_Ecto-sp13_S_contig6788.17717.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6788 351..1966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6788.17717.1 ID=prot_Ecto-sp13_S_contig6788.17717.1|Name=mRNA_Ecto-sp13_S_contig6788.17717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
MSAVEARTSQLKAFMINADTSRSVLDVSKLWISRRMLVAEATLLRAYGGV
GPTARAQDAIRQGRRVRLRRIFRAFETAWRENLMSRPPEETLETIESSDC
IG*
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