prot_Ecto-sp13_S_contig67635.17685.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67635.17685.1
Unique Nameprot_Ecto-sp13_S_contig67635.17685.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: D7FX60_ECTSI (WD40 repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 4.940e-27
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM
Sbjct:  214 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 263          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: A0A7S3Y2P2_HETAK (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2P2_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 8.160e-21
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            G KSHPEVARF+PDG+ L +GSVDGFVEVWD D CRLRKDL YQA+DEFM
Sbjct:   37 GAKSHPEVARFAPDGRALVTGSVDGFVEVWDPDGCRLRKDLEYQARDEFM 86          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: A0A7R8XD53_9CRUS (WD40 repeat-containing protein SMU1 n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XD53_9CRUS)

HSP 1 Score: 90.1 bits (222), Expect = 7.890e-20
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            GTKSHPEVARFSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FM
Sbjct:  283 GTKSHPEVARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 332          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: A0A8K0K9C4_LADFU (Uncharacterized protein (Fragment) n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0K9C4_LADFU)

HSP 1 Score: 87.0 bits (214), Expect = 9.620e-20
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            G KSH E ARFSPDGQYL +GSVDGFVEVW+F T ++RKDL YQAKDEFM
Sbjct:   16 GAKSHVECARFSPDGQYLVTGSVDGFVEVWNFTTGKIRKDLKYQAKDEFM 65          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: UPI000C6DAE8E (WD40 repeat-containing protein SMU1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DAE8E)

HSP 1 Score: 82.8 bits (203), Expect = 6.440e-19
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            G KSH E ARFSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FM
Sbjct:   48 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 97          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: UPI0006D73149 (WD40 repeat-containing protein SMU1-like n=1 Tax=Myotis lucifugus TaxID=59463 RepID=UPI0006D73149)

HSP 1 Score: 82.8 bits (203), Expect = 1.910e-18
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            G KSH E ARFSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FM
Sbjct:    2 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 51          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: G1QBV3_MYOLU (WD40 repeat-containing protein SMU1 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=G1QBV3_MYOLU)

HSP 1 Score: 84.7 bits (208), Expect = 2.550e-18
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            G KSH E ARFSPDGQYL +GSVDGF+EVWDF T ++RKDL YQA+D FM
Sbjct:   24 GQKSHVECARFSPDGQYLVTGSVDGFIEVWDFTTGKIRKDLKYQAQDNFM 73          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: UPI0009E248D2 (WD40 repeat-containing protein SMU1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E248D2)

HSP 1 Score: 84.3 bits (207), Expect = 3.120e-18
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            G+KSHPE  +FSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FM
Sbjct:   11 GSKSHPECVKFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 60          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: A0A183BLH0_GLOPA (WD40 repeat-containing protein SMU1 n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BLH0_GLOPA)

HSP 1 Score: 85.5 bits (210), Expect = 3.360e-18
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            G KSHPE A+FSPDGQYL +GSVDGF+EVW+F T +LRKDL YQA+D FM
Sbjct:  213 GAKSHPESAQFSPDGQYLVTGSVDGFIEVWNFTTGKLRKDLKYQAQDNFM 262          
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Match: A0A7M7G2J5_NASVI (WD repeat-containing protein 55 homolog n=39 Tax=Apocrita TaxID=7400 RepID=A0A7M7G2J5_NASVI)

HSP 1 Score: 85.1 bits (209), Expect = 4.420e-18
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    1 GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM 50
            GTKSH E ARFSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FM
Sbjct:  212 GTKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 261          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67635.17685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX60_ECTSI4.940e-27100.00WD40 repeat-containing protein SMU1 n=2 Tax=Ectoca... [more]
A0A7S3Y2P2_HETAK8.160e-2180.00WD40 repeat-containing protein SMU1 (Fragment) n=1... [more]
A0A7R8XD53_9CRUS7.890e-2078.00WD40 repeat-containing protein SMU1 n=1 Tax=Darwin... [more]
A0A8K0K9C4_LADFU9.620e-2078.00Uncharacterized protein (Fragment) n=1 Tax=Ladona ... [more]
UPI000C6DAE8E6.440e-1972.00WD40 repeat-containing protein SMU1-like n=1 Tax=C... [more]
UPI0006D731491.910e-1872.00WD40 repeat-containing protein SMU1-like n=1 Tax=M... [more]
G1QBV3_MYOLU2.550e-1874.00WD40 repeat-containing protein SMU1 n=3 Tax=Boreoe... [more]
UPI0009E248D23.120e-1870.00WD40 repeat-containing protein SMU1-like n=1 Tax=O... [more]
A0A183BLH0_GLOPA3.360e-1874.00WD40 repeat-containing protein SMU1 n=1 Tax=Globod... [more]
A0A7M7G2J5_NASVI4.420e-1874.00WD repeat-containing protein 55 homolog n=39 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 10..31
e-value: 4.4E-6
score: 27.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 11..34
score: 11.511
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..49
e-value: 2.3E-9
score: 38.6
NoneNo IPR availablePANTHERPTHR22848WD40 REPEAT PROTEINcoord: 1..50
NoneNo IPR availablePANTHERPTHR22848:SF2WD40 REPEAT-CONTAINING PROTEIN SMU1coord: 1..50
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 18..32
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..40
score: 10.812
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 9..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67635contigEcto-sp13_S_contig67635:3..673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67635.17685.1mRNA_Ecto-sp13_S_contig67635.17685.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67635 3..673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67635.17685.1 ID=prot_Ecto-sp13_S_contig67635.17685.1|Name=mRNA_Ecto-sp13_S_contig67635.17685.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
GTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam