prot_Ecto-sp13_S_contig6748.17664.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6748.17664.1
Unique Nameprot_Ecto-sp13_S_contig6748.17664.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length297
Homology
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: D7FQT7_ECTSI (RNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQT7_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 1.940e-166
Identity = 294/297 (98.99%), Postives = 295/297 (99.33%), Query Frame = 0
Query:    1 MVTDEDPANGATAEAEAETNGTXXXXXXXXXXXXXXXXXXXXXXKAKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGGFXXXXXXXXXXXXXXXXXXXXXXXXXXQGWSQQ 297
            MVTDEDPANGATAEAEAETNGTXXXXXXXXXXXXXXXXXXXXXXKAKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSA+ARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGGFXXXXXXXXXXXXXX XXXXXXXXXX QGWSQQ
Sbjct:    1 MVTDEDPANGATAEAEAETNGTXXXXXXXXXXXXXXXXXXXXXXKAKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSANARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGGFXXXXXXXXXXXXXXYXXXXXXXXXXQQGWSQQ 297          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: A0A7S3UWI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWI8_HETAK)

HSP 1 Score: 191 bits (485), Expect = 8.250e-57
Identity = 99/207 (47.83%), Postives = 136/207 (65.70%), Query Frame = 0
Query:   49 LSHEEQQKA-DVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRD 254
            +S E  +++ DV GK+FLGG++WQTTED LK +F K+G L D  +M++K TG+PRGFGFVQF+++++ D  L EEH IDGR +D+K+A+ R+ AP  RA +++                         KIFVGGL+Q V + DF+ YF KFG + DAVVM D+ T RSRGFGF+TY   + V +VM+  TH L+ K VE+K A PRD
Sbjct:    1 MSDERPERSNDVTGKLFLGGVSWQTTEDGLKFYFEKFGKLKDCAVMKDKFTGQPRGFGFVQFEDASAVDKVLAEEHTIDGRVLDIKKAISREHAP--RAISEKID---------------------VKKIFVGGLEQAVTEGDFKDYFGKFGDITDAVVMMDRNTNRSRGFGFVTYADAESVNRVMNE-THTLRDKVVEIKRAEPRD 183          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: A0A7S2XZ50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ50_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.960e-56
Identity = 99/194 (51.03%), Postives = 130/194 (67.01%), Query Frame = 0
Query:   60 EGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPR 253
            EGK+F+GG++WQTTED L+ +F K+G L DV +M++K TG+PRGFGFV F++++  +  L + H +DGR +D KRAV R+ +  PR                GG +GG      + KIFVGGL   V + DFRGYF KFG + DAVVM D+ TGRSRGFGF+TYD    VR V++G +HE+KGK VEVK A PR
Sbjct:    4 EGKVFIGGVSWQTTEDGLRYYFEKFGELTDVAVMKDKFTGQPRGFGFVTFKDTSVVEKVLGQTHTLDGRQVDCKRAVRREESSAPR----------------GGGYGGE-----SKKIFVGGLAPSVEEDDFRGYFDKFGTITDAVVMMDRNTGRSRGFGFVTYDDESSVRDVLAG-SHEIKGKFVEVKRAEPR 175          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: A0A835ZAL5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL5_9STRA)

HSP 1 Score: 192 bits (489), Expect = 6.760e-56
Identity = 107/219 (48.86%), Postives = 140/219 (63.93%), Query Frame = 0
Query:   50 SHEEQQKADVEGKIFLG---GLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKE-EHVIDGRTIDVKRAVPRDRAPLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGG 264
            S E  + +DV GK+F+G   G++WQT+E+ L  HF K+GAL DV LM++K TG+PRGFGF++F++ +  DA L + EH IDGR +DVKRAVP+  AP P          AR   Q              NK+FVGGL   V  A+FR YF  FG V DAVVM+D++T RSRGFGF+T+    +V+ V+ G THEL GK VEVKTA P++  R  + GGG
Sbjct:    4 SDEIDKDSDVTGKLFVGKSSGISWQTSEESLSYHFSKFGALADVALMKDKYTGQPRGFGFIKFEDPSVLDAVLAQPEHNIDGRVVDVKRAVPKSEAPGP----------ARATRQAD-----------FNKVFVGGLAPSVTAAEFRQYFEGFGAVSDAVVMFDRQTQRSRGFGFVTFQDESVVQNVLMG-THELNGKMVEVKTAEPKESRRNASPGGG 200          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: D7FW71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW71_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 8.930e-56
Identity = 103/209 (49.28%), Postives = 138/209 (66.03%), Query Frame = 0
Query:   46 AKELSHEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRD 254
            A  ++H++    DVEGK+F+GG++WQTTE+ L+ HFGK+G L D+ LM++K TG PRGFGF++F++ T  D  L +EH IDG+ +DVKRAVP+  AP P   + R+S  A                  TNKIFVGGL   V  A+FR YF  FG V DAVVM+D++T RSRGFGF+T+    +V  +M G THE+ GK VEVK A P++
Sbjct:  135 AGSVAHDKDN--DVEGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGP---SSRSSRPAE-----------------TNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMG-THEINGKMVEVKRAEPKE 320          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: A0A8K1C8M2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8M2_PYTOL)

HSP 1 Score: 194 bits (494), Expect = 4.660e-55
Identity = 102/206 (49.51%), Postives = 137/206 (66.50%), Query Frame = 0
Query:   61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDR-APLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGGF 265
            GK+F+GG++W+TTED L+ HFGK+GAL D  LM++K TG+PRGFGFV F ++T+ D  L+E HVIDGRT++VKRA+PRD+ AP P   +D       G                + KIFVGGL   V + DFR YF +FGK+ DAVVM D+ T RSRGFGF+T+D    V +V+S  +HE+ GK+VE+K A P++      G GG+
Sbjct:   99 GKLFIGGVSWETTEDSLRGHFGKYGALTDAALMKDKFTGQPRGFGFVTFADATAIDRVLEESHVIDGRTVEVKRAIPRDKTAPGP---SDGRFGGGYGRXXXXXXXXXXXGYTESKKIFVGGLAPSVTEQDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFVTFDEEGAVAEVISK-SHEIHGKTVEIKRAEPKE----VRGSGGY 296          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: A0A3M6VT05_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT05_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.870e-54
Identity = 102/205 (49.76%), Postives = 138/205 (67.32%), Query Frame = 0
Query:   61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDR-APLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGG 264
            GK+F+GG++W+TTED L+ HFGK+G L D  LM++K TG+PRGFGFV F ++++ D  L+E H +DGR+++VKRA+PR+R AP         S+  RGG + G   GG  +     KIFVGGL   V + DFR YF +FGK  DAVVM D+ T RSRGFGFIT++    V +V+S  +HE+ GK VE+K A P++      GGGG
Sbjct:  115 GKLFIGGVSWETTEDTLRQHFGKYGPLTDAALMKDKYTGQPRGFGFVTFADASAIDRVLEETHTLDGRSVEVKRAIPRERTAP--------GSSEIRGGGRGGFSSGGFTEQ---KKIFVGGLAPTVTEQDFRHYFEEFGKTTDAVVMIDRDTQRSRGFGFITFEEESSVAEVISK-SHEIHGKIVEIKRAEPKES----RGGGG 303          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: A0A5A7PXB6_STRAF (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PXB6_STRAF)

HSP 1 Score: 189 bits (481), Expect = 3.330e-54
Identity = 98/207 (47.34%), Postives = 135/207 (65.22%), Query Frame = 0
Query:   60 EGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSASARGGSQ-VGGRHGGMN-DAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRDGPRQFNGGGG 264
            + K+F+GG++W+TTED+L  HF K+G ++  ++ +++++G+PRGF FV F ES++ D AL+E H I GRT++VKRA+PR           +   ++RG S+   G + G N D   T KIFVGGL   + + +FR YFAKFG++ D VVM+D  T R RGFGFITYDS D V +VM    HEL GK VEVK A P+DG      G G
Sbjct:    6 QNKLFVGGISWETTEDILNEHFNKYGVVSGSVIAKDRVSGQPRGFAFVTFSESSAVDRALQESHQILGRTVEVKRAIPRSEQQ------SQQQHNSRGLSRNFSGTNKGRNTDEFRTKKIFVGGLSTNLTEQEFRSYFAKFGRITDVVVMHDNMTHRPRGFGFITYDSEDSVEEVMQKNFHELAGKLVEVKRAVPKDGSNSSGNGYG 206          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: D8RTI0_SELML (Uncharacterized protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RTI0_SELML)

HSP 1 Score: 183 bits (465), Expect = 3.520e-54
Identity = 93/195 (47.69%), Postives = 130/195 (66.67%), Query Frame = 0
Query:   60 EGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRD-RAPLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPR 253
            +GK+F+GG++W+TTE+ L+ +F ++G + + ++M+++ TG  RGFGFV F + ++AD A+ E+H I+GR ++ K+AVPRD +  +PR      S+ + GG   GG  G       T KIFVGGL   V + +FRGYF +FG + DAVVMYD  T R RGFGFIT+DS D V  V+    HELK K VEVK A PR
Sbjct:    5 QGKLFIGGISWETTEEQLRDYFQRYGEIAETMIMKDRNTGRARGFGFVSFADPSAADMAVAEKHTINGRLVEAKKAVPRDEQQTIPR------SSISSGGQSPGGGQG------RTKKIFVGGLASTVTEEEFRGYFEQFGTISDAVVMYDHTTQRPRGFGFITFDSEDSVEAVLMKSFHELKDKMVEVKRAVPR 187          
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Match: A0A5A7RED1_STRAF (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RED1_STRAF)

HSP 1 Score: 191 bits (485), Expect = 6.990e-54
Identity = 96/194 (49.48%), Postives = 129/194 (66.49%), Query Frame = 0
Query:   61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRD 254
            GK+F+GG++W T E+ LK +FG +G + + ++MR++ TG  RGFGF+ F + T A+  +KE+HVIDGRT++ K+AVPRD   L     +RNS+S+  GS + GR         T KIFVGGL   V + DF+ YF++FG + D VVMYD  T R RGFGFITYDS D V +V+    HEL  K VEVK A PR+
Sbjct:   13 GKLFVGGISWDTNEERLKDYFGTYGDVMEAVIMRDRTTGRARGFGFIVFADPTVAERVIKEKHVIDGRTVEAKKAVPRDDHNLT----NRNSSSSTQGSPIPGR---------TKKIFVGGLASTVTETDFKNYFSQFGSITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNAKMVEVKRAVPRE 193          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6748.17664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT7_ECTSI1.940e-16698.99RNA-binding protein, putative n=2 Tax=Ectocarpus T... [more]
A0A7S3UWI8_HETAK8.250e-5747.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZ50_9STRA2.960e-5651.03Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZAL5_9STRA6.760e-5648.86Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D7FW71_ECTSI8.930e-5649.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1C8M2_PYTOL4.660e-5549.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VT05_9STRA2.870e-5449.76Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A5A7PXB6_STRAF3.330e-5447.34RNA-binding (RRM/RBD/RNP motifs) family protein n=... [more]
D8RTI0_SELML3.520e-5447.69Uncharacterized protein (Fragment) n=3 Tax=Selagin... [more]
A0A5A7RED1_STRAF6.990e-5449.48RNA-binding (RRM/RBD/RNP motifs) family protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 176..248
e-value: 2.0E-23
score: 93.8
coord: 62..133
e-value: 1.7E-21
score: 87.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 63..130
e-value: 1.6E-15
score: 56.6
coord: 177..234
e-value: 6.1E-15
score: 54.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 175..252
score: 16.909
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 61..137
score: 16.978
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 164..258
e-value: 8.7E-24
score: 85.6
coord: 47..142
e-value: 3.1E-26
score: 93.5
NoneNo IPR availablePANTHERPTHR11176:SF13GENE 17190-RELATEDcoord: 168..293
NoneNo IPR availablePANTHERPTHR11176:SF13GENE 17190-RELATEDcoord: 54..161
IPR037366BOULE/DAZ familyPANTHERPTHR11176BOULE-RELATEDcoord: 168..293
IPR037366BOULE/DAZ familyPANTHERPTHR11176BOULE-RELATEDcoord: 54..161
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 61..167
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 174..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6748contigEcto-sp13_S_contig6748:4719..7997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6748.17664.1mRNA_Ecto-sp13_S_contig6748.17664.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6748 4719..7997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6748.17664.1 ID=prot_Ecto-sp13_S_contig6748.17664.1|Name=mRNA_Ecto-sp13_S_contig6748.17664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
MVTDEDPANGATAEAEAETNGTAETNDTADVTAAADGAPAVEGEKAKELS
HEEQQKADVEGKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGE
PRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADR
NSASARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGK
VEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTA
APRDGPRQFNGGGGFNGGGYGGGGGYGGGYGGGGGGGYGGQQGWSQQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR037366BOULE/DAZ
IPR035979RBD_domain_sf