prot_Ecto-sp13_S_contig67387.17651.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67387.17651.1
Unique Nameprot_Ecto-sp13_S_contig67387.17651.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length58
Homology
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: D7FQS6_ECTSI (Pyridoxal 5'-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 6.370e-28
Identity = 53/58 (91.38%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVT   S  Y
Sbjct:  417 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTEKESTEY 474          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: A0A6H5K1Z4_9PHAE (Pyridoxal 5'-phosphate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Z4_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.180e-26
Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            QGFDKRGFVWYTNFESRKSQE SHNP+GALSFWWSEVQRAVRIEGVMTKVT   S  Y
Sbjct:  418 QGFDKRGFVWYTNFESRKSQETSHNPFGALSFWWSEVQRAVRIEGVMTKVTDQESTEY 475          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: UPI00198C3BFD (Pyridoxal 5'-phosphate synthase n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI00198C3BFD)

HSP 1 Score: 78.6 bits (192), Expect = 3.850e-17
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            +GFD+RG VWYTN++SRK QE++ NPY AL F W E++R VRIEGV+ KV+ + S  Y
Sbjct:   76 KGFDERGIVWYTNYDSRKGQELAGNPYAALQFHWVELERTVRIEGVVEKVSAEESDAY 133          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: A0A482SL99_9ARCH (Pyridoxamine 5'-phosphate oxidase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL99_9ARCH)

HSP 1 Score: 80.5 bits (197), Expect = 5.940e-17
Identity = 32/51 (62.75%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVT 51
            +GFD+RGFVWYTN+ESRK QE+  NP+ AL+FWW E++R+VRIEG + +V+
Sbjct:  106 KGFDERGFVWYTNYESRKGQELVDNPHAALTFWWGELERSVRIEGKVERVS 156          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: UPI0019861455 (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Ferruginibacter sp. TaxID=1940288 RepID=UPI0019861455)

HSP 1 Score: 78.2 bits (191), Expect = 2.410e-16
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            +GFD RG VWYTNF+SRK QE++ NP+ AL F W E++R VRIEG++TKV+ + S  Y
Sbjct:   70 KGFDARGIVWYTNFDSRKGQELAGNPFAALQFHWVELERVVRIEGLVTKVSDEESDAY 127          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: A0A2N2SZ50_9PROT (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-18 TaxID=2013709 RepID=A0A2N2SZ50_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 3.440e-16
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            +G+D+RG VWYTN+ESRK QE++ NPY AL F W E++R VRIEGV+ KV+ + S  Y
Sbjct:   66 KGYDERGIVWYTNYESRKGQELAGNPYAALQFHWVELERVVRIEGVVEKVSNEESDDY 123          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: A0A7S2XW57_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW57_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.540e-16
Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            +GFD+RG+VWYTN+ESRK QE+S NP+ +L FWW ++ R+VRIEG + KV+ + S  Y
Sbjct:  138 KGFDERGWVWYTNYESRKGQELSANPWASLVFWWGDLHRSVRIEGKVEKVSAEESDEY 195          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: A0A257H0J0_9BURK (Pyridoxamine 5'-phosphate oxidase (Fragment) n=1 Tax=Burkholderiales bacterium PBB4 TaxID=2015566 RepID=A0A257H0J0_9BURK)

HSP 1 Score: 75.9 bits (185), Expect = 7.350e-16
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            +G+D +G VWYTN+ESRK QE++ NPY AL F W E++R VRIEGV+ KV+ + S  Y
Sbjct:   66 KGYDAQGIVWYTNYESRKGQELAGNPYAALQFHWVELERVVRIEGVVEKVSNEESDAY 123          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: A0A7R9YBU3_9STRA (Pyridoxal 5'-phosphate synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBU3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.800e-16
Identity = 29/58 (50.00%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            +G+D  GFVWYTN+ SRK+QE+  NP+ AL+FWW +++R+VRIEG + +++ + S  Y
Sbjct:   33 KGYDSEGFVWYTNYGSRKAQELDANPFAALTFWWGDLERSVRIEGRVQRISKEESEAY 90          
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Match: A0A1V6F3A4_9PROT (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Alphaproteobacteria bacterium ADurb.Bin100 TaxID=1852791 RepID=A0A1V6F3A4_9PROT)

HSP 1 Score: 75.9 bits (185), Expect = 1.670e-15
Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKVTFDSSIFY 58
            +G+D+RG VWYTN+ES+K QE++ NPY AL F W E++R VRIEG++ KV+ + S  Y
Sbjct:   65 KGYDERGIVWYTNYESQKGQELAGNPYAALQFHWVELERVVRIEGLVEKVSAEDSDAY 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67387.17651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQS6_ECTSI6.370e-2891.38Pyridoxal 5'-phosphate synthase n=1 Tax=Ectocarpus... [more]
A0A6H5K1Z4_9PHAE1.180e-2687.93Pyridoxal 5'-phosphate synthase n=1 Tax=Ectocarpus... [more]
UPI00198C3BFD3.850e-1758.62Pyridoxal 5'-phosphate synthase n=1 Tax=Polaromona... [more]
A0A482SL99_9ARCH5.940e-1762.75Pyridoxamine 5'-phosphate oxidase n=1 Tax=archaeon... [more]
UPI00198614552.410e-1658.62Pyridoxamine 5'-phosphate oxidase n=1 Tax=Ferrugin... [more]
A0A2N2SZ50_9PROT3.440e-1658.62Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 T... [more]
A0A7S2XW57_9STRA3.540e-1656.90Pyridoxal 5'-phosphate synthase n=1 Tax=Fibrocapsa... [more]
A0A257H0J0_9BURK7.350e-1656.90Pyridoxamine 5'-phosphate oxidase (Fragment) n=1 T... [more]
A0A7R9YBU3_9STRA7.800e-1650.00Pyridoxal 5'-phosphate synthase (Fragment) n=1 Tax... [more]
A0A1V6F3A4_9PROT1.670e-1555.17Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012349FMN-binding split barrelGENE3D2.30.110.10coord: 1..58
e-value: 1.9E-17
score: 65.2
IPR011576Pyridoxamine 5'-phosphate oxidase, putativePFAMPF01243Putative_PNPOxcoord: 2..51
e-value: 1.1E-10
score: 41.5
NoneNo IPR availablePANTHERPTHR10851:SF0PYRIDOXINE-5'-PHOSPHATE OXIDASEcoord: 2..55
NoneNo IPR availableSUPERFAMILY50475FMN-binding split barrelcoord: 2..51
IPR000659Pyridoxamine 5'-phosphate oxidasePANTHERPTHR10851PYRIDOXINE-5-PHOSPHATE OXIDASEcoord: 2..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67387contigEcto-sp13_S_contig67387:202..375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67387.17651.1mRNA_Ecto-sp13_S_contig67387.17651.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67387 202..375 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67387.17651.1 ID=prot_Ecto-sp13_S_contig67387.17651.1|Name=mRNA_Ecto-sp13_S_contig67387.17651.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp
QGFDKRGFVWYTNFESRKSQEMSHNPYGALSFWWSEVQRAVRIEGVMTKV
TFDSSIFY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012349Split_barrel_FMN-bd
IPR011576Pyridox_Oxase_put
IPR000659Pyridox_Oxase