prot_Ecto-sp13_S_contig67348.17647.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67348.17647.1
Unique Nameprot_Ecto-sp13_S_contig67348.17647.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: D7FT57_ECTSI (ARL8, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT57_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 2.570e-35
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    5 QAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKV 69
            +AALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQ+IRELNLDYVTANPWILIPISALKV
Sbjct:   98 KAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQIIRELNLDYVTANPWILIPISALKV 162          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: A0A7S2C4S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4S7_9STRA)

HSP 1 Score: 105 bits (263), Expect = 3.820e-27
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    8 LARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVNGV 72
            LAR+ELHRLLED ELA+TPLLVLANKVDLEPH+SE ++I ELNLDY+  NPWI+IPISALKV  +
Sbjct:  101 LARKELHRLLEDRELATTPLLVLANKVDLEPHISEPELITELNLDYIVDNPWIVIPISALKVTNI 165          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: F0YA37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA37_AURAN)

HSP 1 Score: 105 bits (263), Expect = 4.020e-27
Identity = 48/62 (77.42%), Postives = 58/62 (93.55%), Query Frame = 0
Query:    8 LARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKV 69
            LAR+ELHRLLED ELA+TPLLV+ANK+DL+PH+SE  +IRELNLDY+T NPWI+IP+SALKV
Sbjct:  101 LARKELHRLLEDRELATTPLLVIANKIDLDPHISEPDLIRELNLDYITENPWIVIPVSALKV 162          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: A0A485LCR6_9STRA (Aste57867_19416 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCR6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.420e-26
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 NPSAQAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKV 69
            N   Q +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+SE ++IRELNLDY+  NPW++IPISAL++
Sbjct:  147 NAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHISEPELIRELNLDYIVDNPWLVIPISALRL 215          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: A0A8J2SSV8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSV8_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.830e-26
Identity = 48/65 (73.85%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    8 LARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVNGV 72
            LAR+ELHRLLED ELA+TP+LV++NK+DLEPH++E  +IR+LNLDYVT NPWI+IPISALKV  V
Sbjct:  101 LARKELHRLLEDRELATTPVLVVSNKIDLEPHVTEGDLIRDLNLDYVTENPWIVIPISALKVVNV 165          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: F0WPJ3_9STRA (AlNc14C187G8338 protein n=34 Tax=Oomycota TaxID=4762 RepID=F0WPJ3_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.420e-25
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 NPSAQAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKV 69
            N   Q +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+ E ++IRELNLDYV  NPW++IP SAL++
Sbjct:  127 NAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHICEPELIRELNLDYVVDNPWLMIPCSALRL 195          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: A0A2D4CIT1_PYTIN (Arf/Sar family, other n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIT1_PYTIN)

HSP 1 Score: 105 bits (263), Expect = 4.370e-25
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 NPSAQAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKV 69
            N   Q +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+SE ++IRELNLDY+  NPW++IPISAL++
Sbjct:   94 NAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHISEPELIRELNLDYIVDNPWLVIPISALRL 162          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: A0A7S2RSV3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSV3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.840e-25
Identity = 43/64 (67.19%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    9 ARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKVNGV 72
            A++ELHRLLED++LA+TP+LVLANK+DL+PH+SE ++IRELNLDY+  NPW++IPISAL+V  +
Sbjct:  102 AKKELHRLLEDQQLATTPILVLANKIDLDPHVSEAELIRELNLDYIVDNPWVVIPISALQVTNI 165          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: A0A0P1AND5_PLAHL (Adp-ribosylation factor family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AND5_PLAHL)

HSP 1 Score: 105 bits (263), Expect = 4.860e-25
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 NPSAQAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALKV 69
            N   Q +LAR+ELHRLLED ELA+TPLLVLANK+DLEPH+SE ++IRELNLDY+  NPW++IPISAL++
Sbjct:   94 NAFDQISLARKELHRLLEDRELATTPLLVLANKIDLEPHISEPELIRELNLDYIVDNPWLVIPISALRL 162          
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Match: A0A836CK42_9STRA (ARL8, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK42_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 6.890e-23
Identity = 42/65 (64.62%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    4 AQAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELNLDYVTANPWILIPISALK 68
            A+ A A+RELHRLLED +L+STPLLVLANK+DL+PH+ E  +I+ELN+DY+  +PW++IPISAL+
Sbjct:   98 ARLASAKRELHRLLEDRQLSSTPLLVLANKIDLQPHVGEADLIKELNMDYIMDSPWLIIPISALR 162          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67348.17647.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT57_ECTSI2.570e-3596.92ARL8, ARF-like Ras superfamily GTPase n=2 Tax=Ecto... [more]
A0A7S2C4S7_9STRA3.820e-2776.92Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YA37_AURAN4.020e-2777.42Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A485LCR6_9STRA1.420e-2671.01Aste57867_19416 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J2SSV8_9STRA4.830e-2673.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0WPJ3_9STRA1.420e-2569.57AlNc14C187G8338 protein n=34 Tax=Oomycota TaxID=47... [more]
A0A2D4CIT1_PYTIN4.370e-2571.01Arf/Sar family, other n=2 Tax=Pythium insidiosum T... [more]
A0A7S2RSV3_9STRA4.840e-2567.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0P1AND5_PLAHL4.860e-2571.01Adp-ribosylation factor family n=1 Tax=Plasmopara ... [more]
A0A836CK42_9STRA6.890e-2364.62ARL8, ARF-like ras superfamily GTPase n=1 Tax=Trib... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 9..72
e-value: 4.0E-12
score: 45.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..75
e-value: 1.6E-12
score: 49.2
NoneNo IPR availablePANTHERPTHR45732FAMILY NOT NAMEDcoord: 4..72
NoneNo IPR availablePANTHERPTHR45732:SF2coord: 4..72
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67348contigEcto-sp13_S_contig67348:309..542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67348.17647.1mRNA_Ecto-sp13_S_contig67348.17647.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67348 309..542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67348.17647.1 ID=prot_Ecto-sp13_S_contig67348.17647.1|Name=mRNA_Ecto-sp13_S_contig67348.17647.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
NPSAQAALARRELHRLLEDEELASTPLLVLANKVDLEPHMSEDQVIRELN
LDYVTANPWILIPISALKVNGVAFGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR027417P-loop_NTPase