prot_Ecto-sp13_S_contig672.17618.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig672.17618.1
Unique Name	prot_Ecto-sp13_S_contig672.17618.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1484

Homology

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BLAST of mRNA_Ecto-sp13_S_contig672.17618.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)

HSP 1 Score: 1234 bits (3192), Expect = 0.000e+0
Identity = 1006/1175 (85.62%), Postives = 1024/1175 (87.15%), Query Frame = 0

Query:  322 RPVAGDXXXGRGEAESDVQVSFPPHFNDGRKSGSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDSAAGGSPRTPLSDNSSTHDGXXXXXXXXXXXXXXXXXXXXXXXXLPPEVSVGNAGAGGDGEFDDMDLPSAHPTPLSAFGGGDGEXXXXXXXXXXXLGSSMDRGRSQSRAGGDGDDKSADGRSKSIEAASGSFMQRLKYWSGMNRQDSSTSMASAPSKHGRGHRGGSAGAGGSRVAVAAVQGSAATXXXXA-----TSXXXXXXXXXXXXXXXXXXXXXXXXRIARTASSVSQGGVSPRKLPASFTRSSGRIADPRGSGGVRPSQVARPSTAKSGSSGXXXXXXXXXXXXXXXXXXXXXXXX------YSETTTSEASGISPSELRGVPVVPFDSVTSDATSAYNAGPPPAYRSHGGGRVRT-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPAGRLGDDAAAEKEEGAPARSRQFSDFGASHRAELAAMRRARGTPSPGDEEVKDEEKEVXXXXXXXEGEMNWGATSDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAPEEPKPLRXXXXXXXXXXXXXXXXXXXXXXXXXXX-RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMTLGGGGVHKRRPSRRRQLSNMSNRTLHGVAGGEGEEEDADSDEGSVVDAGVAARKLRRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYIAQGGDLEASSIRDQFQATALMLCAERGHTQMVDDLLSAGAEVSCVDENANSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLATDPAIRRILRTEQMVRFSGETFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAIASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGRLEMKNLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDADLGRXXXXXXXXXXXXRHLADRMESVHKLLKGVSALQ 1483
            RP AGD XX   +AESDVQV+FP HF+DGRK+GSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDSAAGGSPRTPLSDNSS H           XXXXXXXXXXXXXXXLPP VSVGNAGAGGDGE+DDMDLPSAHPTPLSAFGGGDGEXXXXXXXXXXX  SS  RGRS SRAGGDGDDKSADGRSKSIEA SGSFMQRLKYWSGM  QDSSTSMASAPSKHGRGHRGGS GAGGSRV V AVQGSAAT XXX      +           X  XXXXXXXXXXX      SS  QGGVSPRKLPASFTRSSGRIADPRGSGGVRPS+ A+PSTA SGSS XXXXXXXXXXXXXX                YSET  SEASGISP ELRGVPV+PFDSVTSDATSAYNAGPPPAYRSHGGGRV T A         XXXXXXXXXXXXXXXXXXXXXXXXXXXPSPAGR GDDA+AEKEEGAPA+SR+FSDFGASHRAELAAMRRARGT SPGDEEVKD     XXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DV PE+PKPLR  XXXXXXXXXXXXXXXXXXXXXXXXX RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAM LGGGGVHKRRPSRRRQLSNMSNRTLH VAGGEGEEEDADSDEGSV+DAG AARKLRRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYI+QGGDLE   IRDQFQATALMLCAERGHTQMVDDL                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DLATDPAIRRILR EQMVRFSGE FDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVA+ASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSI XXXXXXXXXXXXXXXXXXXXXX    +AGGR EMK+LLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKD DLG XXXXXXXXXXXX  LADRMESVHKLLKGVSALQ
Sbjct:    8 RPAAGDGXXXXXDAESDVQVNFPSHFDDGRKNGSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDSAAGGSPRTPLSDNSSAH-----------XXXXXXXXXXXXXXXLPPAVSVGNAGAGGDGEYDDMDLPSAHPTPLSAFGGGDGEXXXXXXXXXXXXXSSTGRGRSLSRAGGDGDDKSADGRSKSIEAGSGSFMQRLKYWSGMTHQDSSTSMASAPSKHGRGHRGGSTGAGGSRVTVEAVQGSAATAXXXXXXXXXSGAGRAAGTAAAXKEXXXXXXXXXXXXXXXXXSSAPQGGVSPRKLPASFTRSSGRIADPRGSGGVRPSEAAQPSTANSGSSXXXXXXXXXXXXXXXRSRPVAAAPLSESPPPYSETARSEASGISPCELRGVPVMPFDSVTSDATSAYNAGPPPAYRSHGGGRVSTVAAVSSTRQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPAGRPGDDASAEKEEGAPAKSRKFSDFGASHRAELAAMRRARGTSSPGDEEVKDXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDVPPEKPKPLRYGXXXXXXXXXXXXXXXXXXXXXXXXXXRYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMALGGGGVHKRRPSRRRQLSNMSNRTLHSVAGGEGEEEDADSDEGSVMDAGAAARKLRRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYISQGGDLE---IRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXXCEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDLGXXXXXXXXXXXXXXXLADRMESVHKLLKGVSALQ 1167

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BLAST of mRNA_Ecto-sp13_S_contig672.17618.1 vs. uniprot
Match: A0A7D3ZNW7_9ACTN (Ankyrin repeat domain protein n=1 Tax=Actinomadura verrucosospora TaxID=46165 RepID=A0A7D3ZNW7_9ACTN)

HSP 1 Score: 60.8 bits (146), Expect = 6.160e-6
Identity = 59/224 (26.34%), Postives = 90/224 (40.18%), Query Frame = 0

Query: 1119 LAVPKDDRGEVIHVHTAAYNGKQDVLKAYIAQGGDLEASSIRDQFQATALMLCAERGHTQMVDDLLSAGAEVSCVDENANSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLATDPAIRRILRTEQMVRFSGETFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAIASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDG 1342
            LA   DD      + TAAY G   VLK  IA G D+ A+   D+   TAL++ A       V+ LL+AGA+         +A                                  ++  +         E  V  +    D  G ++V    + A    +   A         + IA+K++ L+   + G+S +H AA HG+AD +RLLLEAG++PN   + G
Sbjct:   16 LATGSDDVSRADALRTAAYLGDLAVLKEQIAAGADVNAA---DERGWTALLVAAREAFRDGVEALLAAGADPGIALPGGFTALHQVIQHTKDRPVKYEVTVVRDGVETVLTGRD--EIRAETGSHPDDEYEDCVDVARMLID--GGIDVEMATSEAGQTPLSHAASRGTAEITELLIATKQVDLDSRDKDGVSPLHYAARHGHADPVRLLLEAGANPNITENYG 232

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig672.17618.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig672.17618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LK98_ECTSI	0.000e+0	85.62	Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta...	[more]
A0A7D3ZNW7_9ACTN	6.160e-6	26.34	Ankyrin repeat domain protein n=1 Tax=Actinomadura...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 863..883
None	No IPR available	PFAM	PF13637	Ank_4	coord: 1309..1362 e-value: 2.2E-9 score: 37.7
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 1131..1247 coord: 1298..1400
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 1127..1156 e-value: 1600.0 score: 3.5 coord: 1163..1192 e-value: 0.12 score: 21.4 coord: 1196..1225 e-value: 0.007 score: 25.6 coord: 1308..1337 e-value: 5.2E-4 score: 29.3 coord: 1341..1370 e-value: 3.6E-4 score: 29.9
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 1196..1228 score: 11.808
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 1341..1373 score: 12.182
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 1163..1195 score: 9.511
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 1308..1340 score: 12.209
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 1133..1225 e-value: 2.1E-12 score: 47.5
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1132..1394 score: 43.423
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1095..1251 e-value: 9.0E-29 score: 102.1
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1282..1404 e-value: 3.9E-23 score: 83.6
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 1129..1395

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig672	contig	Ecto-sp13_S_contig672:6949..18811 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig672.17618.1	mRNA_Ecto-sp13_S_contig672.17618.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig672 6949..20121 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig672.17618.1 ID=prot_Ecto-sp13_S_contig672.17618.1|Name=mRNA_Ecto-sp13_S_contig672.17618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1484bp
MAPAVHVGRGWNGGSPSLRGEAAAADTTTAITEHQKHFQGDDSNKHHTTA
AASSQAVRPVRSRYAWSGGAGTSSSRSSAAAGTESGEGRKQQRSSGSGGL
AAEHRRHQRRQERHSCSSFEGYVTEGVGEELGRGSTTTSPSFTTSTTSSL
APAKLDKNATAEDEAPQPRGGAPGQFFGSGYHGGGKSKQQQQQQQQQQQG
ARKVQHQAVAAAGAAPPGLAAQGHRHVDEKASRATDSVREAWRIRGGVGN
REGERQRQARAPAWQQQQQRQGDSEPDLGGSSPGKGSASPRKDEAPPGFE
PLDTTTSDSGGGGIMSSGRHHRPVAGDGGGGRGEAESDVQVSFPPHFNDG
RKSGSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDS
AAGGSPRTPLSDNSSTHDGGGVGAAGSRRGGGGGGGAQEEGGGLPPEVSV
GNAGAGGDGEFDDMDLPSAHPTPLSAFGGGDGELPPDHPTPKSSLGSSMD
RGRSQSRAGGDGDDKSADGRSKSIEAASGSFMQRLKYWSGMNRQDSSTSM
ASAPSKHGRGHRGGSAGAGGSRVAVAAVQGSAATAAAAATSGAGRAAGTA
AAAKDATATATAASTRIARTASSVSQGGVSPRKLPASFTRSSGRIADPRG
SGGVRPSQVARPSTAKSGSSGGGDDSSSTRSRPVAAAPLSESPPPYSETT
TSEASGISPSELRGVPVVPFDSVTSDATSAYNAGPPPAYRSHGGGRVRTA
AAVSSTRQGPSPPYSAAVRKQQEQEEAARLAAAAAAPSPAGRLGDDAAAE
KEEGAPARSRQFSDFGASHRAELAAMRRARGTPSPGDEEVKDEEKEVSDE
EEQEEGEMNWGATSDKEEEKEEEEEKKQDFSAAFSPVTTAAAAAAATSKT
ASPRPPPRYLATSIKPSEQTTTTTTSASGGNDGGGLDVAPEEPKPLRHGG
SSSSPRHQASPSSPSQAALPPPPPRYMAIVEAANVKSALDNSSTSEHTDT
SPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMTLGGGG
VHKRRPSRRRQLSNMSNRTLHGVAGGEGEEEDADSDEGSVVDAGVAARKL
RRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYIAQ
GGDLEASSIRDQFQATALMLCAERGHTQMVDDLLSAGAEVSCVDENANSA
LHLACFYGNTEAVELLLAVDADIAVVDSEGRTPLDLATDPAIRRILRTEQ
MVRFSGETFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAIASKRL
RLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTAC
NGGSILCATLLLEHGANPLATDANGLVPCEKHVAGGRLEMKNLLEAKAFQ
ATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDADLGR
LRQAVEARDTDIRHLADRMESVHKLLKGVSALQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf