prot_Ecto-sp13_S_contig6716.17611.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6716.17611.1
Unique Nameprot_Ecto-sp13_S_contig6716.17611.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length356
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6716.17611.1 vs. uniprot
Match: D8LM22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM22_ECTSI)

HSP 1 Score: 418 bits (1075), Expect = 2.170e-134
Identity = 276/354 (77.97%), Postives = 287/354 (81.07%), Query Frame = 0 
Query:    1 MRFAPHKLGKVDRLLAKYAGNENKLLRIVRRKYVDAGESENTSEIQQNATSAAAASGVAEGPGSIPVSSGDGEVNGQQAVVHQPPPSASSPTRVDTAPVHGGETVPLGEATRNGHRSRQALVKSKANSTEGQTSAWEERVGDGTKPKNGDVHSKTFTPDARILDPPRDPGGGGPGKEEGPAPASSSSSWAVQHDSEHDPEALARETEILEGWERLHPPPEAPAPTRAPVEEDYLVGPRKPSPPAAXXXXXXXXXXXXXXXXXXTVNVDAGQEESMNGGDGLGXXXXXXIRNACSXXXXXXXXXXXXXXXXPAATVESMIQRAFEDDRKMTLRLKCPLQQQRGGAMDPQACSRRP 354
            MRFAPHKLGKVDRLL KYAG+ENKLLRIVRRKYVD G                        PGSIPVSSGD EV+GQQAV HQPPP ASSPT+ DTAPVHGGET+PLGEA R+GHRSRQALVKSKANSTEGQTSAWEER+ DGTKPK+GDVHS+T  PDARILDPPRDPGGGGPGKEEGPAPASSSSSWAVQHDSEHDPEALARETEILEGWERLHPPPEAPAPTRAPVEED +VGPRKPSP   XXXXXXXXXXXXXXXXXX                   XXXXXX      XXXXXXXXXXXXXXXXPAATVESMIQRAFEDDRKMTLRLKCPLQQQRGGAMD Q  ++ P
Sbjct:  632 MRFAPHKLGKVDRLLVKYAGDENKLLRIVRRKYVDTG------------------------PGSIPVSSGDSEVSGQQAVDHQPPPWASSPTQADTAPVHGGETIPLGEAARDGHRSRQALVKSKANSTEGQTSAWEERLVDGTKPKHGDVHSETCPPDARILDPPRDPGGGGPGKEEGPAPASSSSSWAVQHDSEHDPEALARETEILEGWERLHPPPEAPAPTRAPVEEDCVVGPRKPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAATVESMIQRAFEDDRKMTLRLKCPLQQQRGGAMDAQITTKLP 961
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BLAST of mRNA_Ecto-sp13_S_contig6716.17611.1 vs. uniprot
Match: A0A6H5KQV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV9_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.600e-53
Identity = 135/157 (85.99%), Postives = 142/157 (90.45%), Query Frame = 0 
Query:  191 VQHDSEHDPEALARETEILEGWERLHPPPEAPAPTRAPVEEDYLVGPRKPSPPAAXXXXXXXXXXXXXXXXXXTVNVDAGQEESMNGGDGLGXXXXXXIRNACSXXXXXXXXXXXXXXXXPAATVESMIQRAFEDDRKMTLRLKCPLQQQRGGAMDP 347
            ++HDSEHDPEALARETEILEGWERLHPPP+APAPTRAPVE+DY+VGPRKPSP   XXXXXX  XXXXXXXX  TVN DAGQEES+NGGDG GXXXXXX      XXXXXXXXXXXXXXXXPAATVESMIQRAFEDDR+MTLRLKCPLQQQRGGAMDP
Sbjct:    1 MRHDSEHDPEALARETEILEGWERLHPPPQAPAPTRAPVEDDYVVGPRKPSPXXXXXXXXXDGXXXXXXXXSSTVNDDAGQEESINGGDGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAATVESMIQRAFEDDRRMTLRLKCPLQQQRGGAMDP 157
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BLAST of mRNA_Ecto-sp13_S_contig6716.17611.1 vs. uniprot
Match: A0A6H5KPS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS6_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.090e-52
Identity = 112/146 (76.71%), Postives = 119/146 (81.51%), Query Frame = 0 
Query:    1 MRFAPHKLGKVDRLLAKYAGNENKLLRIVRRKYVDAGESENTSEI------QQNATSAAAAS--------GVAEGPGSIPVSSGDGEVNGQQAVVHQPPPSASSPTRVDTAPVHGGETVPLGEATRNGHRSRQALVKSKANSTEGQ 132
            MRFAPHKLGKVDRLLAKYAG+ENKLLRIVRRKYVD G       +      +++ATSAA           GVAEG GSIPVSSGDGEVNGQQAV HQPPPS+SSPTRVDTAPVHGGET+PLGEATRNGHRSRQALVKSKANSTEGQ
Sbjct:  598 MRFAPHKLGKVDRLLAKYAGDENKLLRIVRRKYVDTGRMRLLQSLLVYIEGRKDATSAAXXXXXXXXXXXGVAEGQGSIPVSSGDGEVNGQQAVDHQPPPSSSSPTRVDTAPVHGGETIPLGEATRNGHRSRQALVKSKANSTEGQ 743
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6716.17611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM22_ECTSI2.170e-13477.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQV9_9PHAE2.600e-5385.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPS6_9PHAE1.090e-5276.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6716contigEcto-sp13_S_contig6716:1036..3873 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6716.17611.1mRNA_Ecto-sp13_S_contig6716.17611.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6716 1009..3873 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6716.17611.1 ID=prot_Ecto-sp13_S_contig6716.17611.1|Name=mRNA_Ecto-sp13_S_contig6716.17611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=356bp
MRFAPHKLGKVDRLLAKYAGNENKLLRIVRRKYVDAGESENTSEIQQNAT
SAAAASGVAEGPGSIPVSSGDGEVNGQQAVVHQPPPSASSPTRVDTAPVH
GGETVPLGEATRNGHRSRQALVKSKANSTEGQTSAWEERVGDGTKPKNGD
VHSKTFTPDARILDPPRDPGGGGPGKEEGPAPASSSSSWAVQHDSEHDPE
ALARETEILEGWERLHPPPEAPAPTRAPVEEDYLVGPRKPSPPAAAAAKS
NDGNGDGDGDGSSTVNVDAGQEESMNGGDGLGGGGGGGIRNACSGGGKGG
SAKGGRRRRKPAATVESMIQRAFEDDRKMTLRLKCPLQQQRGGAMDPQAC
SRRPR*
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