prot_Ecto-sp13_S_contig6693.17576.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6693.17576.1
Unique Nameprot_Ecto-sp13_S_contig6693.17576.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length389
Homology
BLAST of mRNA_Ecto-sp13_S_contig6693.17576.1 vs. uniprot
Match: A0A6H5KAZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ5_9PHAE)

HSP 1 Score: 456 bits (1174), Expect = 2.620e-157
Identity = 338/388 (87.11%), Postives = 344/388 (88.66%), Query Frame = 0
Query:    1 MDMDIPLQQXXXXXXXXXXXXXHHVKQXXPWPQHQAXXXXXXXXXXXXXXXXXXXQQTLVRDVDQRPSPLLSDYVPPAGFTHVNVPVLLQQTASAIVRWEELQKSLDVRSDSAPANLAAQAHVRSSLKRDLTNLTQLADAQTKHTQKLKFRQMQAMQQXXXXXXXXXXXXXXXXXXXQGVQPLPGGGNPARDGTGVGLDAAGAGVATGEAYDGFPPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPTGAVLMQQGAXXXXXXXXAQGPGSXXXXXAPPPSNRHEGIRQRIDRTEPANKWIVLVDASLRLPPSDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICSRFQHGSQQ 388
            MDMDIPLQQXXXXXXXXX    HHV+QXXPWPQHQAXXXXXXXXXXXXXXXXX  QQTLVRD DQRPSPLLSDYVPPAG   VNVPVLLQQTA AIVRWEELQK+LDVRSDSA ANLAAQAHVRSSLKRDLTNL QLADAQTKHTQK+KFRQMQAMQ   XXXXXXXXXXXXXXXX QGVQPLPGG NPAR GTG GLD+A AGVATGEAYD FPPKR   XXXXXXXXXXXXXXXXXXXXXXXX          GPTGA+LMQQGA XXXXXXX      XXXXXAPP SNRHEGIRQRIDRTEPANKW+VLVDASLRLPP DGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICSRFQHGSQQ
Sbjct:    1 MDMDIPLQQXXXXXXXXXR---HHVQQXXPWPQHQAXXXXXXXXXXXXXXXXXQQQQTLVRDADQRPSPLLSDYVPPAGLALVNVPVLLQQTACAIVRWEELQKNLDVRSDSASANLAAQAHVRSSLKRDLTNLIQLADAQTKHTQKMKFRQMQAMQ---XXXXXXXXXXXXXXXXAQGVQPLPGGRNPARGGTGAGLDSARAGVATGEAYDEFPPKRKQVXXXXXXXXXXXXXXXXXXXXXXXXNASSYAASNSGPTGAMLMQQGAGXXXXXXXXXXXXXXXXXXAPP-SNRHEGIRQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICSRFQHGSQQ 381          
BLAST of mRNA_Ecto-sp13_S_contig6693.17576.1 vs. uniprot
Match: D8LB93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB93_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 3.180e-92
Identity = 195/242 (80.58%), Postives = 197/242 (81.40%), Query Frame = 0
Query:  148 LKFRQMQAMQQXXXXXXXXXXXXXXXXXXXQGVQPLPGGGNPARDGTGVGLDAAGAGVATGEAYDGFPPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GPTGAVLMQQGAXXXXXXXXAQGPGSXXXXXAPPPSNRHEGIRQRIDRTEPANKWIVLVDASLRLPPSDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICSRFQHGSQQ 388
            +KFRQMQAMQQ                   QGVQPLP G NPARDGTGVGLDAA  GVA GEAYDGFPPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GP GAVLMQQGAXXXXX   AQGPG      APPPSNRHEGIRQRIDRTEPANKW+VLVDASLRLPP DGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICSRFQ GSQQ
Sbjct:    1 MKFRQMQAMQQQATEPAASAAAAVA-----QGVQPLPEGRNPARDGTGVGLDAARRGVAAGEAYDGFPPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSYAASNSGPIGAVLMQQGAXXXXXGVGAQGPGPG----APPPSNRHEGIRQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICSRFQDGSQQ 233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6693.17576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAZ5_9PHAE2.620e-15787.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB93_ECTSI3.180e-9280.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6693contigEcto-sp13_S_contig6693:2686..5029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6693.17576.1mRNA_Ecto-sp13_S_contig6693.17576.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6693 2543..5529 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6693.17576.1 ID=prot_Ecto-sp13_S_contig6693.17576.1|Name=mRNA_Ecto-sp13_S_contig6693.17576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=389bp
MDMDIPLQQQQQQQQQQQHRRRHHVKQQQPWPQHQAQGHHEVSKQPLPQN
PQQQQQQTLVRDVDQRPSPLLSDYVPPAGFTHVNVPVLLQQTASAIVRWE
ELQKSLDVRSDSAPANLAAQAHVRSSLKRDLTNLTQLADAQTKHTQKLKF
RQMQAMQQQATEPAAAAAAAAAAAAAAQGVQPLPGGGNPARDGTGVGLDA
AGAGVATGEAYDGFPPKRQQVVVQQPQQVPPSGGALRAVGGGGPVNASSY
AASSSGPTGAVLMQQGAGGGSGGGGAQGPGSGPGPGAPPPSNRHEGIRQR
IDRTEPANKWIVLVDASLRLPPSDGTTFEHFTCMIQNFLNNYNGDVGAEV
ARALGSCLDPRVFDPTDIKRAQERMADICSRFQHGSQQ*
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