prot_Ecto-sp13_S_contig6691.17570.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6691.17570.1
Unique Nameprot_Ecto-sp13_S_contig6691.17570.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length362
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6691.17570.1 vs. uniprot
Match: A0A6H5LNS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNS9_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 1.520e-110
Identity = 302/370 (81.62%), Postives = 309/370 (83.51%), Query Frame = 0 
Query:    3 NNRGDGRGPRGGEGFGGEGYGPPGERRQPPYGG-QQSQQDHWQADQWQPHPRHGPGADFPRFPPDDDLEAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-----TKAAEVDPAVVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEEEYDDEKERGTGAGVKPKEEEGVNAGTAMGEGATPASGTEMDGGDNGCGDSINTTPAQLATDDXXXXXXXXXXXXXXXXXX------YGDLXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGMAEEVSTRAVMNALKRLEAPIFIPAPPEASSVSLILGDISVGLPLNVLTAPETY 360
            NNRGDGR PRGGEGFGGE YGPPGERRQPPYGG QQSQQD WQADQWQPH +HGPG DFPRFP DDDLEAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      TKAAEVDPAVVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEE YDDEKERG GA VKPKE+ GVNAGTAMG+GATPASGT MDGGDNG GD INTT AQLATDDXXXXXXXXXXXXXXXXXX      YGDL     XXXXXX  XXXXXXXXXXXXXXQ      XXXXX          XXX        GMAEEVSTRAVMNALKRLE PIFIPAPPEA+ VS +LG+ISVGLPL+VLTAPETY
Sbjct: 1327 NNRGDGRAPRGGEGFGGERYGPPGERRQPPYGGHQQSQQDRWQADQWQPHSQHGPGGDFPRFPMDDDLEAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAAEVDPAVVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEEGYDDEKERGAGADVKPKEQGGVNAGTAMGKGATPASGTGMDGGDNGYGDGINTTLAQLATDDXXXXXXXXXXXXXXXXXXXXXXXLYGDLYGGLDXXXXXXTDXXXXXXXXXXXXXXQXXX--XXXXXXVGEEDQGALNXXXALEAGGGDGMAEEVSTRAVMNALKRLEGPIFIPAPPEATPVSSMLGNISVGLPLDVLTAPETY 1694
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BLAST of mRNA_Ecto-sp13_S_contig6691.17570.1 vs. uniprot
Match: D8LPQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ7_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 1.350e-104
Identity = 266/359 (74.09%), Postives = 271/359 (75.49%), Query Frame = 0 
Query:    6 GDGRGPRGGEGFGGEGYGPPGERRQPPYGG-QQSQQDHWQADQWQPHPRHGPGADFPRFPPDDDLEAIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTKAAEVDPAVVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEEEYDDEKERGTGAGVKPKEEEGVNAGTAMGEGATPASGTEMDGGDNGCGDSINTTPAQLATDDXXXXXXXXXXXXXXXXXX---YGDLXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXGMAEEVSTRAVMNALKRLEAPIFIPAPPEASSVSLILGDISVGLPLNVLTAPETY 360
            GDGRGPRGGEGFGGEGYGPPGERRQPPYGG QQSQQD WQADQWQPHPRHGPG DFPRFPPDDDLEAIAE                                  AAEVDPAVVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEE YDDE+ERGTGAGVKPK                     EMDGGDNG GD INTTPAQLATD+  XXXXXXXXXXXXXXXX   YGDL               XXXXXXXXXXXX DGA   XXXXXXXXXXXXXXXXXXXXXXXXX GMAEEVSTRAVMNALKRLE PIFIPAPPEA+ VSL+LGDISVGLPLNVL+APETY
Sbjct: 1407 GDGRGPRGGEGFGGEGYGPPGERRQPPYGGHQQSQQDRWQADQWQPHPRHGPGGDFPRFPPDDDLEAIAE----------------------------------AAEVDPAVVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDDVEAGLTFEPEEGYDDEEERGTGAGVKPKXXXXXXXXXXXXXXXXXXXXXEMDGGDNGYGDGINTTPAQLATDESGXXXXXXXXXXXXXXXXXXLYGDLYGGLDDDGGGGTDMDXXXXXXXXXXXXXDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGMAEEVSTRAVMNALKRLEGPIFIPAPPEATPVSLMLGDISVGLPLNVLSAPETY 1731
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6691.17570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LNS9_9PHAE1.520e-11081.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPQ7_ECTSI1.350e-10474.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6691contigEcto-sp13_S_contig6691:2594..5311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6691.17570.1mRNA_Ecto-sp13_S_contig6691.17570.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6691 1796..5391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6691.17570.1 ID=prot_Ecto-sp13_S_contig6691.17570.1|Name=mRNA_Ecto-sp13_S_contig6691.17570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=362bp
MYNNRGDGRGPRGGEGFGGEGYGPPGERRQPPYGGQQSQQDHWQADQWQP
HPRHGPGADFPRFPPDDDLEAIAEAEAAAQVAEAKAEAAAAAAASAAAVK
EEEEERTKAAEVDPAVVAVAANLAPVCVSRQLLSEGAYRRLALARQAGDD
VEAGLTFEPEEEYDDEKERGTGAGVKPKEEEGVNAGTAMGEGATPASGTE
MDGGDNGCGDSINTTPAQLATDDSGGGGGGSPDGAEEEDDLYGDLYGGLD
DDGGGGADMEGGGRNGGGGGGGQDGAGGDGGGVGEEGQGAGGLNGGGAVE
AGGGDGMAEEVSTRAVMNALKRLEAPIFIPAPPEASSVSLILGDISVGLP
LNVLTAPETYL*
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