prot_Ecto-sp13_S_contig6669.17542.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6669.17542.1
Unique Nameprot_Ecto-sp13_S_contig6669.17542.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length718
Homology
BLAST of mRNA_Ecto-sp13_S_contig6669.17542.1 vs. uniprot
Match: A0A6H5KLQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ0_9PHAE)

HSP 1 Score: 848 bits (2190), Expect = 1.130e-292
Identity = 546/733 (74.49%), Postives = 554/733 (75.58%), Query Frame = 0
Query:    1 MMVLAEEDDLVARXXXXXXXXXXXGRIECFEPSLLPASPDGGDTWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGRESNSNKEARVVPPSRSGERNVSAPKPXXXXXXXXX----PLGGLTAVEPPGSAKATPPARSDDNHGIFDEGEHSAKISSVFGRPLSVPDSAAAGGDRARMEPGGSAGNSGVGMFFNGSAGREGGARAGVDSLGGGVGAAGRGRRPSVSGCLADDGDXXXXXDSSTCGENGWDPEGWKEGEDSWRTSSFASSSVADASLLEDAAAAADRDGAATAARRAEAKATHDGVGLVAAADSKLEQRHAAGTTEPRSPAGAEVAAAGKKNEGKPGXXXXXXXXXXXXXXXXXXXXXLLATVKELVVELEEDLDAARVLLPECNRFRKVVRCVAES-----------AMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFEDPPAMLGYCTRRLCCAVSALPQPSSSASRAVAARSQLRSLAKGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPTSTATVGVTPVSASATWVPQDRPSLLVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARGVAATAEQPAAVDGGDEVGPGGRAGTSGDCAKEDLDGNPGLRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVLRAAAPRRQNAFHLQQQPQQQ 718
            MMVLAEE DLVAR       XXXXGRIECFEPSLLPASPDGGD WGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGRESNSNKEARVVPPSRSGERN S PK XXXXXXXXX    P GGLTAV+PPGSA+AT PARSDDNHGIFDEGEHSAK+SS FGRPLS PDSAA GGDRARMEPGGSAGN GVGMFFNGSAGREGGAR GVDSLGGGVGAAGRGRRPSVSGCLADDG      DSSTCGENGWDP+GWKEGEDSWRTSSFASSSVADASLLEDAAAAAD DGAA AARR EAKATHDGVGLVAAADSKLEQR AAGTTEP SPAG EVAA GKKN GKPGXXXXXXXXXXXXXXXXXXX   LATV+EL+VELEEDLDAARVLLPECNRFRKVVRCVAES           AMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFEDPPAMLGYCTRRLCCAVSA+P+PSS ASRAVAARSQLRSLAKG PA                                                    AS TS                                                                      ARGVAATAEQPAAVDGGDEV PGGRAGTSGDCAKEDLDGNP LRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVLRAAAPRRQNAFHLQQQPQ Q
Sbjct:   31 MMVLAEEGDLVARTAACGSGXXXXGRIECFEPSLLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGRESNSNKEARVVPPSRSGERNASTPKXXXXXXXXXXXXXXPSGGLTAVKPPGSAEATTPARSDDNHGIFDEGEHSAKVSSSFGRPLSRPDSAAVGGDRARMEPGGSAGNGGVGMFFNGSAGREGGARFGVDSLGGGVGAAGRGRRPSVSGCLADDG--GGDGDSSTCGENGWDPDGWKEGEDSWRTSSFASSSVADASLLEDAAAAADTDGAAAAARRVEAKATHDGVGLVAAADSKLEQRPAAGTTEPTSPAGEEVAAVGKKNAGKPGXXXXXXXXXXXXXXXXXXXRRFLATVRELLVELEEDLDAARVLLPECNRFRKVVRCVAESVGPGMDARPRQAMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFEDPPAMLGYCTRRLCCAVSAVPEPSSFASRAVAARSQLRSLAKGCPA----------------------------------------------------ASATS----------------------------------------------------------------------ARGVAATAEQPAAVDGGDEVSPGGRAGTSGDCAKEDLDGNPDLRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVLRAAAPRRQNAFHLQQQPQHQ 639          
BLAST of mRNA_Ecto-sp13_S_contig6669.17542.1 vs. uniprot
Match: D7FXI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI9_ECTSI)

HSP 1 Score: 815 bits (2106), Expect = 8.900e-281
Identity = 579/692 (83.67%), Postives = 591/692 (85.40%), Query Frame = 0
Query:    1 MMVLAEEDDLVARXXXXXXXXXXXGRIECFEPSLLPASPDGGDTWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGRESNSNKEARVVPPSRSGERNVSAPKPXXXXXXXXX-------PLGGLTAVEPPGSAKATPPARSDDNHGIFDEGEHSAKISSVFGRPLSVPDSAAAG-GDRARMEPGGSAGNSGVGMFFNGSAGREGGARAGVDSLGGGVGAAGRGRRPSVSGCLADDGDXXXXXDSSTCGENGWDPEGWKEGEDSWRTSSFASSSVADASLLEDAAAAADRDGAATAA-RRAEAKATHDGVGLVAAADSKLEQRHAAGTTEPRSPAGAEVAAAGKKNEGKPGXXXXXXXXXXXXXXXXXXXXXLLATVKELVVELEEDLDAARVLLPECNRFRKVVRCVAESAMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFEDPPAMLGYCTRRLCCAVSALPQPSSS-ASRAVAARSQLRSLAKGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-SPTSTATVGVTPVSASATWVPQDRPSLLVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPARGVAATAEQPAAVDGGDEVGPGGRAGTSGDCAKEDLDGNPGLRS-RMGPALTSEAAGLSELIR 680
            MMVLAEED+LVAR      XXXXXGR ECFEP+LLPASPDGGD WGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGRE NSNKEARVVPPSRSGER+ SAP  XXXXXXXXX       P GGLTAVEPPGSA+ATPPAR DDNHGIFDEGEHSAK+SS FGR LS PDS AAG GDRARMEPGGSAGN GVGMFFNGS GREGGAR GVDSLGG VGAAGRGRRPSVSG L DDG XXXX  SSTCGENGWDP+GW+EGEDSWRTSSFASSSVADASLLEDAAAAADRDG      RRAEAKATHDGVGLVAAADSKLEQRHA GTTEPRSPAGAEVAAAGKKNEGKPG XXXXXXXXXXXXXXXXXX   LATV+ L+VELEEDLDAARVLLPECNRFRKVVRCVAESAMGLIEALREATEFSRTLSSPEAFLV+MAELL+DGFEDPPAMLGYCTRRLCC VSALP+PSSS ASRAVAARSQL SLAKGG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A SPTSTATVGVTPVS SATW PQDRPSLLVRA                                         TPARGVAATAEQPAAVDGGDE GPGGRAGTSGDCAK DLD NPGLRS RMGPALTSEAAGLSELIR
Sbjct:    1 MMVLAEEDNLVARTAACGSXXXXXGRTECFEPALLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGREPNSNKEARVVPPSRSGERSASAPXXXXXXXXXXXXXXXXXPPSGGLTAVEPPGSAEATPPARGDDNHGIFDEGEHSAKVSSSFGRRLSRPDSTAAGCGDRARMEPGGSAGNGGVGMFFNGSTGREGGARVGVDSLGGRVGAAGRGRRPSVSGILDDDGXXXXX--SSTCGENGWDPDGWREGEDSWRTSSFASSSVADASLLEDAAAAADRDGXXXXXXRRAEAKATHDGVGLVAAADSKLEQRHATGTTEPRSPAGAEVAAAGKKNEGKPGGXXXXXXXXXXXXXXXXXXRRFLATVRGLLVELEEDLDAARVLLPECNRFRKVVRCVAESAMGLIEALREATEFSRTLSSPEAFLVIMAELLMDGFEDPPAMLGYCTRRLCCVVSALPEPSSSSASRAVAARSQLCSLAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAASPTSTATVGVTPVSVSATWAPQDRPSLLVRATAVGAGESGESDGREEGGWRAGETDGGATAAAAAA------TPARGVAATAEQPAAVDGGDEDGPGGRAGTSGDCAKGDLDSNPGLRSSRMGPALTSEAAGLSELIR 684          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6669.17542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLQ0_9PHAE1.130e-29274.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXI9_ECTSI8.900e-28183.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 355..390
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 536..718
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 514..535
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..513
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6669contigEcto-sp13_S_contig6669:994..4451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6669.17542.1mRNA_Ecto-sp13_S_contig6669.17542.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6669 994..4451 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6669.17542.1 ID=prot_Ecto-sp13_S_contig6669.17542.1|Name=mRNA_Ecto-sp13_S_contig6669.17542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=718bp
MMVLAEEDDLVARTTACGSGGGGGGRIECFEPSLLPASPDGGDTWGGPLE
PSALGGLPILVLCVLGLVSVAWTAFGAATSSGRESNSNKEARVVPPSRSG
ERNVSAPKPPAPAPAPAPPLGGLTAVEPPGSAKATPPARSDDNHGIFDEG
EHSAKISSVFGRPLSVPDSAAAGGDRARMEPGGSAGNSGVGMFFNGSAGR
EGGARAGVDSLGGGVGAAGRGRRPSVSGCLADDGDGDGEGDSSTCGENGW
DPEGWKEGEDSWRTSSFASSSVADASLLEDAAAAADRDGAATAARRAEAK
ATHDGVGLVAAADSKLEQRHAAGTTEPRSPAGAEVAAAGKKNEGKPGGGA
GALAAEREEQEKQEEERRLLATVKELVVELEEDLDAARVLLPECNRFRKV
VRCVAESAMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFEDPPAML
GYCTRRLCCAVSALPQPSSSASRAVAARSQLRSLAKGGPAASGGGGGGSS
SGSTRSSLASSTTLTAAAAASATVAAAAAAAAVLIPEPPPTAASPTSTAT
VGVTPVSASATWVPQDRPSLLVRAAAVGGGESGASDRREEGGWRAGETDG
GATAAAAAAAAAAAATPARGVAATAEQPAAVDGGDEVGPGGRAGTSGDCA
KEDLDGNPGLRSRMGPALTSEAAGLSELIRRRGGLSALSDGRAVAAVLRA
AAPRRQNAFHLQQQPQQQ
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