prot_Ecto-sp13_S_contig6664.17536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6664.17536.1
Unique Nameprot_Ecto-sp13_S_contig6664.17536.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length151
Homology
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: D7G3Y7_ECTSI (Bardet-Biedl syndrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y7_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.120e-83
Identity = 135/151 (89.40%), Postives = 138/151 (91.39%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVYQGTSIFAEH LLDEPSGLCAFYGV+DNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLV+PSDEEL IWTRYRKG+VDAD LKALL K       EDGVRLG LSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATM R
Sbjct:   64 LKVYQGTSIFAEHPLLDEPSGLCAFYGVEDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVEPSDEELEIWTRYRKGEVDADTLKALLAKA-----TEDGVRLGPLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMNR 209          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: A0A8C4X2I9_ERPCA (Bardet-Biedl syndrome 1 n=3 Tax=Polypteridae TaxID=8289 RepID=A0A8C4X2I9_ERPCA)

HSP 1 Score: 111 bits (278), Expect = 9.610e-26
Identity = 61/151 (40.40%), Postives = 95/151 (62.91%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKV++GTS+  E+ LLD P+GL AF+  Q+   T     PA+AVA+GP+I++YKNLRPYFKFT P ++ ++ E  +W++ R+  +D   LK +L  +  +A     V L   S  FL  + +D  SF++     +P+ R T+ITC+ T+K+
Sbjct:   61 LKVFKGTSLMTENTLLDLPTGLVAFHMDQNEPRT-----PAIAVASGPFIYVYKNLRPYFKFTLPPLEVNELEQEVWSQAREDKIDPMSLKEMLEGIRNKAQ----VPLSVRSLKFLMLEHQDMESFVNMH-KQQPIRRQTVITCIGTLKK 201          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: A0A4W5K5E2_9TELE (Bardet-Biedl syndrome 1 n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5K5E2_9TELE)

HSP 1 Score: 107 bits (268), Expect = 1.140e-25
Identity = 61/151 (40.40%), Postives = 92/151 (60.93%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GT + +E+ LLD P+GL +F   Q    T     PA+AVA+GP+I++YKNLRPYFKFT P ++ +  E  +W + R+  +D   LK +L  +  +A     V L   S  FL  D +D  +F++   A +P+ R T+ITC+ T+K+
Sbjct:   69 LKVYRGTGLMSENTLLDLPTGLVSFLMDQHEPRT-----PAIAVASGPFIYVYKNLRPYFKFTLPPLEVNALEQDVWNQAREDMIDPLSLKEMLEGIRDKAD----VPLSVRSLRFLMLDPQDTEAFVNLHKA-QPIRRQTVITCIGTLKK 209          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: A0A2I4CFM7_9TELE (Bardet-Biedl syndrome 1 protein n=2 Tax=Rivulidae TaxID=28771 RepID=A0A2I4CFM7_9TELE)

HSP 1 Score: 110 bits (275), Expect = 2.450e-25
Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GT++ +E  LLD PSGL AF+      +      PAVAVA+GP I++YKNLRPYFKFT P ++ +  E  +W + R+G +D   LK +L  +  +    D + L   S  FL+ D+ D   F+      +P+ R T+ITC+ T+K+
Sbjct:   58 LKVYRGTALMSESVLLDLPSGLVAFF-----MDLHEPRIPAVAVASGPCIYVYKNLRPYFKFTLPSLEINPLEQDVWQQVREGQIDPMTLKEMLESIRKK----DDIPLSIRSLRFLSLDVNDMDEFVQLH-RQQPIKRQTVITCIGTLKK 198          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: A0A6P8VJV3_GYMAC (Bardet-Biedl syndrome 1 protein n=2 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8VJV3_GYMAC)

HSP 1 Score: 108 bits (271), Expect = 8.640e-25
Identity = 62/151 (41.06%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GT++ +E  LLD PSGL AF+      +      PAVAVA+GP +++YKNLRPYFKFT P ++ +  E  +W + R+G +D   LK +L  V   A     V L   S  FL+ D +D   F+      +P+ R T+ITC+ T+K+
Sbjct:   58 LKVYRGTALMSESSLLDLPSGLVAFF-----MDLHEPRIPAVAVASGPCVYVYKNLRPYFKFTLPGLRVNTLEQDVWRQVREGQIDPLTLKEMLESVRKTAD----VPLSVRSLRFLSLDTDDMDDFVQLH-KQQPIRRQTVITCIGTLKK 198          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: A0A484C9H6_PERFV (BBS1 domain-containing protein n=5 Tax=Percidae TaxID=8165 RepID=A0A484C9H6_PERFV)

HSP 1 Score: 108 bits (270), Expect = 9.810e-25
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GT++ +E  LLD PSGL AF+      +      PAVAVA+GP +++YKNLRPYFKFT P ++ +  E  +W + R+G +D   LK +L  +  +      V L   S  FL+ + ED   FL      +P+ R T+ITC+ T+K+
Sbjct:    3 LKVYRGTALMSESALLDLPSGLAAFF-----MDLHEPRVPAVAVASGPCVYVYKNLRPYFKFTLPGLEVNALEQDLWQQAREGQIDPVTLKEMLESIRKKVD----VPLSVRSLHFLSLETEDMDDFLQLH-KQQPIRRQTVITCIGTLKK 143          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: A0A0S7GIJ0_9TELE (BBS1 n=3 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7GIJ0_9TELE)

HSP 1 Score: 104 bits (259), Expect = 9.850e-25
Identity = 58/151 (38.41%), Postives = 90/151 (59.60%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GT++ +E+ LLD P+GL AF+      +      PAVAVA+GP I++YKNLRPYFKFT P +  +  E  +W + R+G +D   LK +L  +  +A     + L   S  FL+ + ++   F+      +P+ R T+ITC+ T+K+
Sbjct:   58 LKVYRGTALISENSLLDLPAGLVAFF-----MDLHEPRIPAVAVASGPCIYVYKNLRPYFKFTLPSLDINPLEQDVWQQVREGQIDPVMLKEMLESIRKKAD----IPLSVRSIRFLSLESDEVDEFVQLY-KQQPIRRQTVITCIGTLKK 198          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: A0A8C4AMS6_9TELE (Bardet-Biedl syndrome 1 n=5 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4AMS6_9TELE)

HSP 1 Score: 108 bits (270), Expect = 1.100e-24
Identity = 59/151 (39.07%), Postives = 94/151 (62.25%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GT + +E+ LLD P+GL +F   Q    T     PAVAVA+GP+I++YKNLRPYFKFT P ++ +  E  +W++ ++  +D   LK +L  +  +A     + L + S  FL  DL++  +F++     +P+ R T+ITC+ T+K+
Sbjct:   68 LKVYRGTGLLSENTLLDLPTGLVSFLMEQHEPRT-----PAVAVASGPFIYVYKNLRPYFKFTLPPLEVNPLEQDLWSQAKEDMIDPMSLKEMLESIRDKAD----IPLSARSLRFLMLDLQEMVTFVNLH-KEQPIRRQTVITCINTLKK 208          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: UPI0015AAB691 (Bardet-Biedl syndrome 1 protein n=2 Tax=Elopomorpha TaxID=32521 RepID=UPI0015AAB691)

HSP 1 Score: 108 bits (270), Expect = 1.200e-24
Identity = 58/151 (38.41%), Postives = 95/151 (62.91%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GTS+ +E+ LLD P+GL +F+  Q    T     PA+AVA+GP+I++YKNLRPYFKFT P ++ +  E  +W++ ++  +D   LK +L  +  +A     + L   S  FL  D ++  +F++     +P+ R T+ITC++T+K+
Sbjct:   63 LKVYRGTSMMSENTLLDLPTGLVSFFMDQHEPRT-----PAIAVASGPFIYVYKNLRPYFKFTLPTLEVNPLEQEVWSQAKEDMIDPLSLKEMLEGIRDKAD----IPLSVRSLKFLMLDPQEMEAFVNVH-KQQPIRRQTVITCISTLKK 203          
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Match: UPI0015531553 (Bardet-Biedl syndrome 1 protein isoform X1 n=2 Tax=Trachemys scripta elegans TaxID=31138 RepID=UPI0015531553)

HSP 1 Score: 104 bits (260), Expect = 1.420e-24
Identity = 57/151 (37.75%), Postives = 90/151 (59.60%), Query Frame = 0
Query:    1 LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMKR 151
            LKVY+GT + +E  LLD PS +  F   Q+   T     PAVAV +GP++++YKNLRPYFKFT P +  +  EL +W + ++  +D   LK +L  +  +A     + L   S  FLA D+ +  +F++     +P+ R T+ITC++T+K+
Sbjct:   63 LKVYRGTGLVSESTLLDLPSAIVTFLMDQNEPRT-----PAVAVTSGPFVYVYKNLRPYFKFTLPPLDANPLELDVWEQAKEDMIDPLTLKEMLEGIRDKAE----IPLSVRSLRFLAQDVPEMENFVNLH-KGQPIKRQTVITCMSTLKK 203          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6664.17536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Y7_ECTSI1.120e-8389.40Bardet-Biedl syndrome 1 n=1 Tax=Ectocarpus silicul... [more]
A0A8C4X2I9_ERPCA9.610e-2640.40Bardet-Biedl syndrome 1 n=3 Tax=Polypteridae TaxID... [more]
A0A4W5K5E2_9TELE1.140e-2540.40Bardet-Biedl syndrome 1 n=1 Tax=Hucho hucho TaxID=... [more]
A0A2I4CFM7_9TELE2.450e-2540.40Bardet-Biedl syndrome 1 protein n=2 Tax=Rivulidae ... [more]
A0A6P8VJV3_GYMAC8.640e-2541.06Bardet-Biedl syndrome 1 protein n=2 Tax=Notothenio... [more]
A0A484C9H6_PERFV9.810e-2540.40BBS1 domain-containing protein n=5 Tax=Percidae Ta... [more]
A0A0S7GIJ0_9TELE9.850e-2538.41BBS1 n=3 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7... [more]
A0A8C4AMS6_9TELE1.100e-2439.07Bardet-Biedl syndrome 1 n=5 Tax=Denticeps clupeoid... [more]
UPI0015AAB6911.200e-2438.41Bardet-Biedl syndrome 1 protein n=2 Tax=Elopomorph... [more]
UPI00155315531.420e-2437.75Bardet-Biedl syndrome 1 protein isoform X1 n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032728Bardet-Biedl syndrome 1, N-terminalPFAMPF14779BBS1coord: 1..151
e-value: 2.2E-38
score: 132.2
IPR028784Bardet-Biedl syndrome 1 proteinPANTHERPTHR20870BARDET-BIEDL SYNDROME 1 PROTEINcoord: 1..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6664contigEcto-sp13_S_contig6664:5776..7202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6664.17536.1mRNA_Ecto-sp13_S_contig6664.17536.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6664 5776..7202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6664.17536.1 ID=prot_Ecto-sp13_S_contig6664.17536.1|Name=mRNA_Ecto-sp13_S_contig6664.17536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=151bp
LKVYQGTSIFAEHHLLDEPSGLCAFYGVQDNTNTAGGERPAVAVAAGPYI
FIYKNLRPYFKFTAPLVQPSDEELGIWTRYRKGDVDADKLKALLTKVHPQ
ATPEDGVRLGSLSTDFLAPDLEDRGSFLSARGASEPLSRTTIITCLATMK
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032728BBS1_N
IPR028784BBS1