prot_Ecto-sp13_S_contig66429.17502.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig66429.17502.1
Unique Nameprot_Ecto-sp13_S_contig66429.17502.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length248
Homology
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BLAST of mRNA_Ecto-sp13_S_contig66429.17502.1 vs. uniprot
Match: D8LIK9_ECTSI (Beta strand repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK9_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 1.240e-86
Identity = 191/251 (76.10%), Postives = 200/251 (79.68%), Query Frame = 0 
Query:    1 PEGGRECYRCSPLQGDAAVAADDGGGERLIRGHDLPAGEEGKDKKNKLRADEERGRWRREGGSSDRGTATAVALPEGGAVERTAGEAGPVKRGERGAAGVGAALLGAVLSGLAVLAAGGAGDDDALSESGFLGVG-TGSGDGGDFEAAAHGXXXXXXXXXXXXXXXXXXXXSGLSA--AARRREMDPTNRRETRGGLRSAVTGRKGLAFGRAGDADGPGAQSPSTEPPGGAANGIADSVLGAGDGWGASAT 248
            PEGGRECYRCSPLQGDAAVAA+D GGERL+R HDLP GE+ K+KKNKLRAD ERG  RREGGSS RGTATAVA PEGGAVE TAGEAGPVKRG  GAAG+GAALLGAVLSGLA LAAGGAGDDDALSES FLGVG  GSGDGGDFEAA HG          XXXXXXXXXX       A +RREMDP NRRET    RSAVTGRKGLAFG AGDADGPGA+ PSTEPPGG A+G A SV  AG+ W A  T
Sbjct:   32 PEGGRECYRCSPLQGDAAVAAEDDGGERLVRVHDLPPGEKRKEKKNKLRADGERGGRRREGGSSVRGTATAVAPPEGGAVELTAGEAGPVKRGGGGAAGIGAALLGAVLSGLAALAAGGAGDDDALSESVFLGVGGAGSGDGGDFEAAVHGDAAGGGLIRGXXXXXXXXXXXXXXXXXARKRREMDPANRRETGDEPRSAVTGRKGLAFGGAGDADGPGARPPSTEPPGGGASGTAGSVPDAGNEWDAHTT 282
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BLAST of mRNA_Ecto-sp13_S_contig66429.17502.1 vs. uniprot
Match: A0A6H5JU12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU12_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 7.270e-86
Identity = 186/251 (74.10%), Postives = 192/251 (76.49%), Query Frame = 0 
Query:    1 PEGGRECYRCSPLQGDAAVAADDGGGERLIRGHDLPAGEEGKDKKNKLRADEERGRWRREGGSSDRGTATAVALPEGGAVERTAGEAGPVKRGERGAAGVGAALLGAVLSGLAVLAAGGAGDDDALSESGFLGVG-TGSGDGGDFEAAAH-GXXXXXXXXXXXXXXXXXXXXSGLSAAARRR-EMDPTNRRETRGGLRSAVTGRKGLAFGRAGDADGPGAQSPSTEPPGGAANGIADSVLGAGDGWGASAT 248
            PEGGRECYRCS L G A VAAD GGGERL+RGHDLPA EE K+K+ KLRAD ERGR RREGGSSDRGTATAVA PE G VE TAGEAGPV+RG  GAAGV        LSGL  LAAGGAGDDDALSESGFLGVG  GSGDGGD+EAAAH               XXXX   SG S AARRR EMDP NRRET  G RSAVTGRKGLAFG AGD DGPGAQSPSTEPPGGAANGIA  V GAG+GWGA AT
Sbjct:  113 PEGGRECYRCSLLHGGAGVAADGGGGERLVRGHDLPAREERKEKETKLRADGERGRRRREGGSSDRGTATAVASPERGVVELTAGEAGPVERGGGGAAGVXXXXXXXXLSGLVALAAGGAGDDDALSESGFLGVGGAGSGDGGDYEAAAHEDAAGGGLIRGSGGVXXXXVDGSGRSEAARRRREMDPANRRETGDGPRSAVTGRKGLAFGGAGDTDGPGAQSPSTEPPGGAANGIAGIVPGAGNGWGAHAT 363
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66429.17502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIK9_ECTSI1.240e-8676.10Beta strand repeat-containing protein n=1 Tax=Ecto... [more]
A0A6H5JU12_9PHAE7.270e-8674.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig66429contigEcto-sp13_S_contig66429:1..744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig66429.17502.1mRNA_Ecto-sp13_S_contig66429.17502.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig66429 1..744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig66429.17502.1 ID=prot_Ecto-sp13_S_contig66429.17502.1|Name=mRNA_Ecto-sp13_S_contig66429.17502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=248bp
PEGGRECYRCSPLQGDAAVAADDGGGERLIRGHDLPAGEEGKDKKNKLRA
DEERGRWRREGGSSDRGTATAVALPEGGAVERTAGEAGPVKRGERGAAGV
GAALLGAVLSGLAVLAAGGAGDDDALSESGFLGVGTGSGDGGDFEAAAHG
GAAGGGLIRGSGGGGGAVDGSGLSAAARRREMDPTNRRETRGGLRSAVTG
RKGLAFGRAGDADGPGAQSPSTEPPGGAANGIADSVLGAGDGWGASAT
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