prot_Ecto-sp13_S_contig6630.17492.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6630.17492.1
Unique Nameprot_Ecto-sp13_S_contig6630.17492.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length142
Homology
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: A0A6H5KJG2_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG2_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 9.060e-66
Identity = 130/142 (91.55%), Postives = 133/142 (93.66%), Query Frame = 0
Query:    1 MIVLRSKQPKWSAWQGCHTLAFDRGGERVREPSRKNVSMVAADASPXXXXXXXXXXXXXXXXXXL-AGRGSRAGGGNNSEAQQMGGGDKDHADGHRHRPSMTVASKSTLQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFDG 141
            MIVLRSKQPKWSAWQGCHTL FDRGGERVREPSRKNVSMVAADASP XXXXXXXXXXXXXXXXX  AGRG+RAGGG NSEAQQ GGGDKDHA+GH HRPS+T ASKSTLQVGKISEDHFSLDFCWPLSPLQAFV AMSIFDG
Sbjct:  598 MIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMVAADASPAXXXXXXXXXXXXXXXXXXXAGRGNRAGGGTNSEAQQTGGGDKDHAEGHHHRPSITAASKSTLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 739          
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: D8LGZ8_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ8_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 2.810e-47
Identity = 108/142 (76.06%), Postives = 111/142 (78.17%), Query Frame = 0
Query:    1 MIVLRSKQPKWSAWQGCHTLAFDRGGERVREPSRKNVSMVAADASPXXXXXXXXXXXXXXXXXXLAGRGSRAGGGNNSEAQQMGGGD-KDHADGHRHRPSMTVASKSTLQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFDG 141
            MIVLRSKQPKWSAWQGCHTL FDRGGERVREPSRKNVSM+AADASP XXXXXXXXXXXXXXXXX                        KDH DGH HRPS+T AS+ TLQVGKISEDHFSLDFCWPLSPLQAFV AMSIFDG
Sbjct:  506 MIVLRSKQPKWSAWQGCHTLDFDRGGERVREPSRKNVSMIAADASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHTDGHHHRPSITAASRPTLQVGKISEDHFSLDFCWPLSPLQAFVAAMSIFDG 647          
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: A0A835YQA2_9STRA (Tub domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.710e-25
Identity = 64/140 (45.71%), Postives = 82/140 (58.57%), Query Frame = 0
Query:    2 IVLRSKQPKWSAWQGCHTLAFDRGGERVREPSRKNVSMVAADASPXXXXXXXXXXXXXXXXXXLAGRGSRAGGGNNSEAQQMGGGDKDHADGHRHRPSMTVASKSTLQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFDG 141
            ++L+SK+P+WSAWQGCHTL F+RG +RVREPSRKN+S+V A  +                    A RG  AG G  + A      D D       R +  V     LQ+GK+++D+FSLDF +PLSP QAFV AMS FDG
Sbjct:  413 LLLQSKKPRWSAWQGCHTLCFERGAQRVREPSRKNISVVLAPGA-------------------SASRGELAGKGAAAVASAW---DMDDQQSEALRSAPVV-----LQMGKLADDYFSLDFNYPLSPFQAFVLAMSAFDG 525          
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: A0A4D9CTJ8_9STRA (Tub domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTJ8_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.500e-7
Identity = 48/152 (31.58%), Postives = 69/152 (45.39%), Query Frame = 0
Query:    1 MIVLRSKQPKWSAWQGCHTLAFDRGGERVREPSRKNVSMVAADASPXXXXXXXXXXXXXXXXXXLAGRGSRAGGGNNSEAQQMG----GGDKDHADGHRHRPSMTVASK-STL-------QVGKISEDHFSLDFCWPLSPLQAFVTAMSIFD 140
            ++ L S+ P W   +G H L F+ G +R+  PSRKN+++V A AS                     G G+R  G   +   ++G    GG      G R       AS+  TL       Q+GK+SED +SLDF  P SP QA   A++  +
Sbjct:  455 VLTLHSQPPAWDPDRGLHALDFEMGEQRMPLPSRKNLAVVEATASSLQDYAAGLTEVRASGHRAEGGSGARRRG-RTAVRSRIGLSHLGGGIGLRRGERSGVDDAAASEWGTLERPRFACQLGKLSEDAYSLDFREPFSPFQALAVAVAALE 605          
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: A0A7S1BGR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGR2_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.150e-5
Identity = 20/37 (54.05%), Postives = 28/37 (75.68%), Query Frame = 0
Query:  105 KSTLQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFDG 141
            K  LQ G++++D F++DF WPLSPLQAF T ++ FD 
Sbjct:  149 KIILQFGRVAKDEFTMDFQWPLSPLQAFATTLTSFDS 185          
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: A0A7S2V1J1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J1_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 3.410e-5
Identity = 19/33 (57.58%), Postives = 26/33 (78.79%), Query Frame = 0
Query:  108 LQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFD 140
            +Q G+I+ + FS+DFCWPLSPLQAF  ++S  D
Sbjct:   88 MQFGRIAHNQFSMDFCWPLSPLQAFAISLSSLD 120          
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: A0A482R6S1_9EURY (Tub domain-containing protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482R6S1_9EURY)

HSP 1 Score: 48.9 bits (115), Expect = 3.720e-5
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0
Query:  108 LQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFD 140
            LQ G++S D F++DF WPLSPLQAF   +S FD
Sbjct:   29 LQFGRVSTDEFTMDFQWPLSPLQAFQICLSSFD 61          
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Match: UPI000661F613 (tubby-related protein 2 n=1 Tax=Cavia porcellus TaxID=10141 RepID=UPI000661F613)

HSP 1 Score: 51.2 bits (121), Expect = 8.080e-5
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 0
Query:  105 KSTLQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFDG 141
            K  LQ G++  D F++DFC+PLSPLQAF   +S FDG
Sbjct:  239 KVVLQFGRMGPDTFTMDFCFPLSPLQAFAICLSSFDG 275          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6630.17492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KJG2_9PHAE9.060e-6691.55Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LGZ8_ECTSI2.810e-4776.06Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YQA2_9STRA2.710e-2545.71Tub domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9CTJ8_9STRA7.500e-731.58Tub domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S1BGR2_9STRA3.150e-554.05Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2V1J1_9STRA3.410e-557.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482R6S1_9EURY3.720e-560.61Tub domain-containing protein n=1 Tax=Methanosarci... [more]
UPI000661F6138.080e-556.76tubby-related protein 2 n=1 Tax=Cavia porcellus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000007Tubby, C-terminalPFAMPF01167Tubcoord: 1..140
e-value: 5.0E-19
score: 69.0
NoneNo IPR availablePANTHERPTHR16517:SF7PROTEIN KING TUBBYcoord: 2..140
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 2..140
IPR025659Tubby-like, C-terminalSUPERFAMILY54518Tubby C-terminal domain-likecoord: 2..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6630contigEcto-sp13_S_contig6630:4306..6461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6630.17492.1mRNA_Ecto-sp13_S_contig6630.17492.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6630 4189..6497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6630.17492.1 ID=prot_Ecto-sp13_S_contig6630.17492.1|Name=mRNA_Ecto-sp13_S_contig6630.17492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp
MIVLRSKQPKWSAWQGCHTLAFDRGGERVREPSRKNVSMVAADASPAAAA
AAGAGGKQGKSAASLAGRGSRAGGGNNSEAQQMGGGDKDHADGHRHRPSM
TVASKSTLQVGKISEDHFSLDFCWPLSPLQAFVTAMSIFDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000007Tubby_C
IPR025659Tubby-like_C